RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 C8orf46Q8TAG6 207 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 TBC1D15Q8TC07 691 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 MRI1Q9BV20 369 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 BEX2Q9BXY8 128 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 CHST6Q9GZX3 395 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 FAM234AQ9H0X4 552 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 OR51E2Q9H255 320 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 C19orf12Q9NSK7 152 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 TXNL4BQ9NX01 149 aaKnown RBP12.46□□□□□ -0.41
CD9-210ENST00000543916 ZNF581Q9P0T4 197 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 LPAR3Q9UBY5 353 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 GLS2Q9UI32 602 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 AK6Q9Y3D8 172 aaKnown RBP12.46□□□□□ -0.41
CD9-210ENST00000543916 AUP1Q9Y679 476 aa12.46□□□□□ -0.41
CD9-210ENST00000543916 CSTBP04080 98 aaKnown RBP12.45□□□□□ -0.42
CD9-210ENST00000543916 PPIAL4GP0DN37 164 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 ZNF44P15621 663 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 CD36P16671 472 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 HOXB4P17483 251 aaPredicted RBP12.45□□□□□ -0.42
CD9-210ENST00000543916 GABRR1P24046 479 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 GADD45AP24522 165 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 FGF9P31371 208 aaPredicted RBP12.45□□□□□ -0.42
CD9-210ENST00000543916 OR3A1P47881 315 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 RBM11P57052 281 aaKnown RBP12.45□□□□□ -0.42
CD9-210ENST00000543916 SCN1BQ07699 218 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 IL13RA2Q14627 380 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 CHRFAM7AQ494W8 412 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 NHLRC3Q5JS37 347 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 OR8H2Q8N162 312 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 OR4S1Q8NGB4 309 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 FOXRED1Q96CU9 486 aaPredicted RBP12.45□□□□□ -0.42
CD9-210ENST00000543916 SNX22Q96L94 193 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 VCX3AQ9NNX9 186 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 ST3GAL6Q9Y274 331 aa12.45□□□□□ -0.42
CD9-210ENST00000543916 SONP18583 2426 aaKnown RBP12.45□□□□□ -0.42
CD9-210ENST00000543916 MXRA5Q9NR99 2828 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 TRAV1-2A0A0B4J238 106 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 A0A0G2JK05 382 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 SLC33A1O00400 549 aaPredicted RBP12.44□□□□□ -0.42
CD9-210ENST00000543916 SLC22A1O15245 554 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 ZNF780AO75290 641 aaPredicted RBP12.44□□□□□ -0.42
CD9-210ENST00000543916 FSHBP01225 129 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 MYL9P24844 172 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 LMO1P25800 156 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 GPR176Q14439 515 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 GRK1Q15835 563 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 OR4M1Q8NGD0 313 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 SLC25A28Q96A46 364 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 YIPF6Q96EC8 236 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 CHCHD6Q9BRQ6 235 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 SIRPDQ9H106 197 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 KCNK15Q9H427 330 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 BANF2Q9H503 90 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 SSR3Q9UNL2 185 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 DSCAML1Q8TD84 2053 aa12.44□□□□□ -0.42
CD9-210ENST00000543916 TRBV23-1A0A0A0MS06 115 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 A0A1W2PQ09 198 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 SLC17A2O00624 439 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 GEMIN2O14893 280 aaKnown RBP12.43□□□□□ -0.42
CD9-210ENST00000543916 DEGS1O15121 323 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 LIPFP07098 398 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 GTF2F2P13984 249 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 MMP9P14780 707 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 SRD5A1P18405 259 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 HTR2CP28335 458 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 SRP14P37108 136 aaKnown RBP12.43□□□□□ -0.42
CD9-210ENST00000543916 OR10A3P58181 314 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 ARF6P62330 175 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 EDDM3AQ14507 147 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 KLF17Q5JT82 389 aaPredicted RBP12.43□□□□□ -0.42
CD9-210ENST00000543916 METAP1DQ6UB28 335 aaPredicted RBP12.43□□□□□ -0.42
CD9-210ENST00000543916 GDPD3Q7L5L3 318 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 FAM185AQ8N0U4 392 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 CHST4Q8NCG5 386 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 OR6M1Q8NGM8 313 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 PPA2Q9H2U2 334 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 RNF167Q9H6Y7 350 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 PLGRKTQ9HBL7 147 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 ONECUT1Q9UBC0 465 aa12.43□□□□□ -0.42
CD9-210ENST00000543916 TRAV24A0A0B4J272 114 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 LOC100506127A0A0U1RQW1 187 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 PDCD5O14737 125 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 MGST3O14880 152 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 CRTAPO75718 401 aaPredicted RBP12.42□□□□□ -0.42
CD9-210ENST00000543916 TOX4O94842 621 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 VSIG8P0DPA2 414 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 MGMTP16455 207 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 EDDM3BP56851 147 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 RPL31P62899 125 aaKnown RBP12.42□□□□□ -0.42
CD9-210ENST00000543916 P2RY14Q15391 338 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 METTL11BQ5VVY1 283 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 TMEM200BQ69YZ2 307 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 NR2C2APQ86WQ0 139 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 KIR3DL3Q8N743 410 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 Q8N7P7 452 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 TPRX1Q8N7U7 411 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 OR5D13Q8NGL4 314 aa12.42□□□□□ -0.42
CD9-210ENST00000543916 FAM46BQ96A09 425 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms