RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 NICN1Q9BSH3 213 aa9.96□□□□□ -0.82
DDB1-223ENST00000543658 BPESC1Q9GZL8 116 aa9.96□□□□□ -0.82
DDB1-223ENST00000543658 NARFLQ9H6Q4 476 aa9.96□□□□□ -0.82
DDB1-223ENST00000543658 PLEKHJ1Q9NW61 149 aa9.96□□□□□ -0.82
DDB1-223ENST00000543658 MIOXQ9UGB7 285 aa9.96□□□□□ -0.82
DDB1-223ENST00000543658 A0A0A6YYH2 397 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 A6NJ64 397 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 MCRIP1C9JLW8 97 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 TMPRSS2O15393 492 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 PDCD6O75340 191 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 SLC25A16P16260 332 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 EFNB2P52799 333 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 COL10A1Q03692 680 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 RBM39Q14498 530 aaKnown RBP9.95□□□□□ -0.82
DDB1-223ENST00000543658 PDCD1Q15116 288 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 PAN3Q58A45 887 aaKnown RBP9.95□□□□□ -0.82
DDB1-223ENST00000543658 LRRC10Q5BKY1 277 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 TMEM69Q5SWH9 247 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 SHEQ5VZ18 495 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 LAX1Q8IWV1 398 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 TMEM185AQ8NFB2 350 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 OR10R2Q8NGX6 335 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 ANGPTL6Q8NI99 470 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 C10orf105Q8TEF2 133 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 RAB39BQ96DA2 213 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 RAB3CQ96E17 227 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 DIRAS2Q96HU8 199 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 CCL13Q99616 98 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 NXF2Q9GZY0 626 aaKnown RBP9.95□□□□□ -0.82
DDB1-223ENST00000543658 ABCG5Q9H222 651 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 EXTL2Q9UBQ6 330 aa9.95□□□□□ -0.82
DDB1-223ENST00000543658 SPG11Q96JI7 2443 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 IGKV1D-17A0A075B6S4 117 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 CEACAM18A8MTB9 384 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 HSPB6O14558 160 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 CTDSP2O14595 271 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 NDUFB3O43676 98 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 EIF4EP06730 217 aaKnown RBP9.94□□□□□ -0.82
DDB1-223ENST00000543658 FUT3P21217 361 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 MNDAP41218 407 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 NR4A2P43354 598 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 PLA2G7Q13093 441 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 PRSS57Q6UWY2 283 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 BAIAP2L2Q6UXY1 529 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 Q6ZTK2 550 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 CMTM4Q8IZR5 234 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 CD177Q8N6Q3 437 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 NEIL1Q96FI4 390 aaPredicted RBP9.94□□□□□ -0.82
DDB1-223ENST00000543658 SNX22Q96L94 193 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 GAFA1Q96PS6 74 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 PPA2Q9H2U2 334 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 IFT22Q9H7X7 185 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 SEBOXQ9HB31 216 aaPredicted RBP9.94□□□□□ -0.82
DDB1-223ENST00000543658 TMEM165Q9HC07 324 aa9.94□□□□□ -0.82
DDB1-223ENST00000543658 FUOMA2VDF0 154 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 SLC33A1O00400 549 aaPredicted RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 SIGLEC5O15389 551 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 SOCS1O15524 211 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 NDUFB7P17568 137 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 ELK1P19419 428 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 CDK2P24941 298 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 KCNJ3P48549 501 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 ARFRP1Q13795 201 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 IL18Q14116 193 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 GRK1Q15835 563 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 ESCO2Q56NI9 601 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 SPANXN2Q5MJ10 180 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 ATPAF1Q5TC12 328 aaPredicted RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 Q6P435 159 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 METAP1DQ6UB28 335 aaPredicted RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 ZNF788Q6ZQV5 615 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 GDPD3Q7L5L3 318 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 FAM89BQ8N5H3 189 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 FAM216BQ8N7L0 139 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 SUMF2Q8NBJ7 301 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 OR5D13Q8NGL4 314 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 C15orf40Q8WUR7 153 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 ST8SIA4Q92187 359 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 SDSLQ96GA7 329 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 WDFY2Q96P53 400 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 FOXC2Q99958 501 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 NUDT16L1Q9BRJ7 211 aaKnown RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 DPCDQ9BVM2 203 aaPredicted RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 CHST6Q9GZX3 395 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 FAM234AQ9H0X4 552 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 CHMP1AQ9HD42 196 aaPredicted RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 RABL2AQ9UBK7 228 aaPredicted RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 KAAG1Q9UBP8 84 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 SLC25A10Q9UBX3 287 aaPredicted RBP9.93□□□□□ -0.82
DDB1-223ENST00000543658 ZNF222Q9UK12 451 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 ITGB1BP2Q9UKP3 347 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 RABL2BQ9UNT1 228 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 CELSR2Q9HCU4 2923 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 DSCAML1Q8TD84 2053 aa9.93□□□□□ -0.82
DDB1-223ENST00000543658 TRAV18A0A075B6X5 111 aa9.92□□□□□ -0.82
DDB1-223ENST00000543658 IGHV4-30-2A0A087WSY4 118 aa9.92□□□□□ -0.82
DDB1-223ENST00000543658 A0A0A6YYD4 124 aa9.92□□□□□ -0.82
DDB1-223ENST00000543658 UBE2QL1A1L167 161 aa9.92□□□□□ -0.82
DDB1-223ENST00000543658 XRCC3O43542 346 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms