RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 ZNF766Q5HY98 468 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 FBXW9Q5XUX1 488 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 FBXL14Q8N1E6 418 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 IL22RA1Q8N6P7 574 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 OR56B2PQ8NGI1 322 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 FNDC9Q8TBE3 224 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 DCUN1D4Q92564 292 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 BCL2L2Q92843 193 aaPredicted RBP8.5□□□□□ -1.05
SS18-205ENST00000542420 LRRC46Q96FV0 321 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 ABHD14BQ96IU4 210 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 RBM14Q96PK6 669 aaKnown RBP8.5□□□□□ -1.05
SS18-205ENST00000542420 HIST1H2AAQ96QV6 131 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 FAAP24Q9BTP7 215 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 RSRP1Q9BUV0 290 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 ZNF471Q9BX82 626 aaPredicted RBP8.5□□□□□ -1.05
SS18-205ENST00000542420 PIGMQ9H3S5 423 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 NAA60Q9H7X0 242 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 METTL8Q9H825 291 aaKnown RBP8.5□□□□□ -1.05
SS18-205ENST00000542420 TMEM100Q9NV29 134 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 MLXQ9UH92 298 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 IL17BQ9UHF5 180 aa8.5□□□□□ -1.05
SS18-205ENST00000542420 GEMIN2O14893 280 aaKnown RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 ANGPTL7O43827 346 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 GAPDHP04406 335 aaKnown RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 PATE4P0C8F1 98 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 SMIM6P0DI80 62 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 GLRA1P23415 457 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 LUMP51884 338 aaPredicted RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 RAB1AP62820 205 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 SLC9A3R2Q15599 337 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 CCDC157Q569K6 752 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 LINC00696Q6ZRV3 163 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 HES7Q9BYE0 225 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 NKX6-2Q9C056 277 aaPredicted RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 PLEKHA2Q9HB19 425 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 BARX1Q9HBU1 254 aaPredicted RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 TRBV23-1A0A0A0MS06 115 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 KIR2DS1A0A191URI9 304 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 C13orf42A0A1B0GVH6 325 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 ZNF850A8MQ14 1090 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 F5H0A9 414 aaPredicted RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 SDCBPO00560 298 aaPredicted RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 MSTNO14793 375 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 DIRAS3O95661 229 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 NAPSAO96009 420 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 SFTPBP07988 381 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 KIR2DS4P43632 304 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 SRYQ05066 204 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 IL24Q13007 206 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 RBM39Q14498 530 aaKnown RBP8.49□□□□□ -1.05
SS18-205ENST00000542420 SMCO1Q147U7 214 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 KIR2DS1Q14954 304 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 TSC22D1Q15714 1073 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 ZNF573Q86YE8 665 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 BAP18Q8IXM2 172 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 PLA2G3Q9NZ20 509 aa8.49□□□□□ -1.05
SS18-205ENST00000542420 IGKV1D-8A0A087WSZ0 117 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 C5orf49A4QMS7 147 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 SLC22A20A6NK97 555 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 ANKRD30BLA7E2S9 258 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 H7C1Q1 480 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 RFC3P40938 356 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 CLN3Q13286 438 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 MRPL49Q13405 166 aaKnown RBP8.48□□□□□ -1.05
SS18-205ENST00000542420 TMEM187Q14656 261 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 FBXW12Q6X9E4 464 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 SLC16A13Q7RTY0 426 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 Q8IYB0 196 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 SUMF1Q8NBK3 374 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 RNF141Q8WVD5 230 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 SAT2Q96F10 170 aaPredicted RBP8.48□□□□□ -1.05
SS18-205ENST00000542420 PAPOLGQ9BWT3 736 aaKnown RBP8.48□□□□□ -1.05
SS18-205ENST00000542420 TREM2Q9NZC2 230 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 EYSQ5T1H1 3165 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 MED13Q9UHV7 2174 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 CD300LBA8K4G0 201 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 H0YIZ8 118 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 TRAPPC2LH3BP13 241 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 PTAFRP25105 342 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 MDH2P40926 338 aaKnown RBP8.48□□□□□ -1.05
SS18-205ENST00000542420 KCNJ3P48549 501 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 GNG3P63215 75 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 ARG2P78540 354 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 TGFBR3Q03167 851 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 PIGYQ3MUY2 71 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 LRRC37A5PQ49AS3 106 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 ABCA11PQ4W5N1 156 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 LIAT1Q6ZQX7 453 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 SLC25A26Q70HW3 274 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 C1orf174Q8IYL3 243 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 LGI3Q8N145 548 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 C1orf162Q8NEQ5 155 aaPredicted RBP8.48□□□□□ -1.05
SS18-205ENST00000542420 HPSE2Q8WWQ2 592 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 OR5P3Q8WZ94 311 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 ZNF75AQ96N20 296 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 WDR13Q9H1Z4 485 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 Q9N2K0 584 aa8.48□□□□□ -1.05
SS18-205ENST00000542420 CYTL1Q9NRR1 136 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms