RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ELMOD3Q96FG2 381 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 DYNLRB1Q9NP97 96 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 PLEKHA6Q9Y2H5 1048 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 ABCA12Q86UK0 2595 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 PDCD6O75340 191 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 CD3DP04234 171 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 PGA5P0DJD9 388 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 GIFP27352 417 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 CD200P41217 278 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 PLET1Q6UQ28 207 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 Q8IYB0 196 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 TMEM229BQ8NBD8 167 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 VRK1Q99986 396 aaPredicted RBP23.45■■□□□ 1.34
CCM2-218ENST00000541586 NRIP2Q9BQI9 281 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 FAAP24Q9BTP7 215 aa23.45■■□□□ 1.34
CCM2-218ENST00000541586 ZNF107Q9UII5 783 aaPredicted RBP23.45■■□□□ 1.34
CCM2-218ENST00000541586 NAP1L6A6NFF2 107 aa23.44■■□□□ 1.34
CCM2-218ENST00000541586 CA11O75493 328 aa23.44■■□□□ 1.34
CCM2-218ENST00000541586 CDKN1AP38936 164 aa23.44■■□□□ 1.34
CCM2-218ENST00000541586 TAS2R19P59542 299 aa23.44■■□□□ 1.34
CCM2-218ENST00000541586 ZNF826PQ6ZT77 177 aa23.44■■□□□ 1.34
CCM2-218ENST00000541586 CACNG6Q9BXT2 260 aa23.44■■□□□ 1.34
CCM2-218ENST00000541586 IFT46Q9NQC8 304 aa23.44■■□□□ 1.34
CCM2-218ENST00000541586 RAI1Q7Z5J4 1906 aaPredicted RBP23.43■■□□□ 1.34
CCM2-218ENST00000541586 A6NLC8 198 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 M0R233 179 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 SPRY3O43610 288 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 ACAA1P09110 424 aaPredicted RBP23.43■■□□□ 1.34
CCM2-218ENST00000541586 AKAIN1P0CW23 69 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 FUT3P21217 361 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 ZNF81P51508 661 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 CCR6P51684 374 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 C11orf71Q6IPW1 123 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 BRICD5Q6PL45 260 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 OR4C16Q8NGL9 310 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 SULT4A1Q9BR01 284 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 DPAGT1Q9H3H5 408 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 UFSP2Q9NUQ7 469 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 MCUBQ9NWR8 336 aa23.43■■□□□ 1.34
CCM2-218ENST00000541586 DUSP1P28562 367 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 FAUP35544 74 aaKnown RBP23.42■■□□□ 1.34
CCM2-218ENST00000541586 MPV17LQ2QL34 196 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 STEAP1BQ6NZ63 245 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 OR4S1Q8NGB4 309 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 OR4D10Q8NGI6 311 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 OCSTAMPQ9BR26 566 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 ANAPC10Q9UM13 185 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 UNC79Q9P2D8 2635 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 NOS1APO75052 506 aaPredicted RBP23.42■■□□□ 1.34
CCM2-218ENST00000541586 PTBP3O95758 552 aaKnown RBP23.42■■□□□ 1.34
CCM2-218ENST00000541586 HLA-DMAP28067 261 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 ATAD3CQ5T2N8 411 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 SFRP4Q6FHJ7 346 aaPredicted RBP23.42■■□□□ 1.34
CCM2-218ENST00000541586 WDR82Q6UXN9 313 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 LINC00596Q86U02 117 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 POC1AQ8NBT0 407 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 UPRTQ96BW1 309 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 OR2V2Q96R30 315 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 AK3Q9UIJ7 227 aa23.42■■□□□ 1.34
CCM2-218ENST00000541586 FLNBO75369 2602 aaKnown RBP23.41■■□□□ 1.34
CCM2-218ENST00000541586 APCP25054 2843 aa23.41■■□□□ 1.34
CCM2-218ENST00000541586 ZNF736B4DX44 427 aaPredicted RBP23.41■■□□□ 1.34
CCM2-218ENST00000541586 CBX5P45973 191 aa23.41■■□□□ 1.34
CCM2-218ENST00000541586 IL13RA2Q14627 380 aa23.41■■□□□ 1.34
CCM2-218ENST00000541586 OR52W1Q6IF63 320 aa23.41■■□□□ 1.34
CCM2-218ENST00000541586 LURAP1Q96LR2 239 aa23.41■■□□□ 1.34
CCM2-218ENST00000541586 GMFBP60983 142 aa23.4■■□□□ 1.34
CCM2-218ENST00000541586 IKZF1Q13422 519 aa23.4■■□□□ 1.34
CCM2-218ENST00000541586 MEGF10Q96KG7 1140 aa23.4■■□□□ 1.34
CCM2-218ENST00000541586 HDHD3Q9BSH5 251 aaPredicted RBP23.4■■□□□ 1.34
CCM2-218ENST00000541586 ASH1LQ9NR48 2969 aaKnown RBP23.4■■□□□ 1.34
CCM2-218ENST00000541586 NXPH2O95156 264 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 IGHV1-46P01743 117 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 CD74P04233 296 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 SPRNQ5BIV9 151 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 SNAPC3Q92966 411 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 MS4A5Q9H3V2 200 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 C1orf123Q9NWV4 160 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 RCC2Q9P258 522 aaKnown RBP23.39■■□□□ 1.34
CCM2-218ENST00000541586 EDARQ9UNE0 448 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 ARFGEF3Q5TH69 2177 aa23.39■■□□□ 1.34
CCM2-218ENST00000541586 USF3Q68DE3 2245 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 UBE2QL1A1L167 161 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 FUOMA2VDF0 154 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 M0QYG6 137 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 RAB3DO95716 219 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 TCRBP04435 133 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 NAT1P18440 290 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 DYRK2Q92630 601 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 MARVELD1Q9BSK0 173 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 HES4Q9HCC6 221 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 COPZ2Q9P299 210 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 ZDHHC8Q9ULC8 765 aa23.39■■□□□ 1.33
CCM2-218ENST00000541586 hCG_1807616A0A1W2PRN6 198 aa23.38■■□□□ 1.33
CCM2-218ENST00000541586 RSBN1Q5VWQ0 802 aaPredicted RBP23.38■■□□□ 1.33
CCM2-218ENST00000541586 OR56B4Q8NH76 319 aa23.38■■□□□ 1.33
CCM2-218ENST00000541586 CREB3L1Q96BA8 519 aa23.38■■□□□ 1.33
CCM2-218ENST00000541586 CMSS1Q9BQ75 279 aaKnown RBP23.38■■□□□ 1.33
CCM2-218ENST00000541586 ST6GALNAC5Q9BVH7 336 aa23.38■■□□□ 1.33
CCM2-218ENST00000541586 TINAGL1Q9GZM7 467 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms