RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 GZMKP49863 264 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 WFDC3Q8IUB2 231 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 CA13Q8N1Q1 262 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 ARHGAP5-AS1Q96IT6 56 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 B9D1Q9UPM9 204 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 DHHO43323 396 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 NAT1P18440 290 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 CA6P23280 308 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 KLF3P57682 345 aaPredicted RBP13.71□□□□□ -0.21
HMGA2-210ENST00000541363 ROM1Q03395 351 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 RTP5Q14D33 572 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 MBNL1Q9NR56 388 aaKnown RBP13.71□□□□□ -0.21
HMGA2-210ENST00000541363 VAX2Q9UIW0 290 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 OR2W1Q9Y3N9 320 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 NCMAPQ5T1S8 102 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 FOXB1Q99853 325 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 SIRT5Q9NXA8 310 aa13.71□□□□□ -0.21
HMGA2-210ENST00000541363 ZNF441Q8N8Z8 693 aa13.71□□□□□ -0.22
HMGA2-210ENST00000541363 TM4SF19Q96DZ7 209 aa13.71□□□□□ -0.22
HMGA2-210ENST00000541363 WSB2Q9NYS7 404 aaPredicted RBP13.71□□□□□ -0.22
HMGA2-210ENST00000541363 CXorf1O96002 111 aa13.71□□□□□ -0.22
HMGA2-210ENST00000541363 WDR25Q64LD2 544 aaPredicted RBP13.71□□□□□ -0.22
HMGA2-210ENST00000541363 MRPL54Q6P161 138 aaKnown RBP13.71□□□□□ -0.22
HMGA2-210ENST00000541363 ASCL5Q7RTU5 278 aa13.71□□□□□ -0.22
HMGA2-210ENST00000541363 RAB1CQ92928 201 aa13.71□□□□□ -0.22
HMGA2-210ENST00000541363 KISS1Q15726 138 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 SLC25A35Q3KQZ1 300 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 OIT3Q8WWZ8 545 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 ALKBH3Q96Q83 286 aaPredicted RBP13.7□□□□□ -0.22
HMGA2-210ENST00000541363 FAM74A7A6NL05 159 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 SNURFLB1AK76 121 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 KCNMB1Q16558 191 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
HMGA2-210ENST00000541363 AKAP12Q02952 1782 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 PRNTQ86SH4 94 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 CXXC4Q9H2H0 198 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
HMGA2-210ENST00000541363 RBFOX2O43251 390 aaKnown RBP eCLIP13.7□□□□□ -0.221e-16■■■■■ 57.2
HMGA2-210ENST00000541363 DLK1P80370 383 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 TMEM136Q6ZRR5 245 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 C16orf52Q8NHV5 167 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 SIRT7Q9NRC8 400 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 IER3P46695 156 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 MVB12AQ96EY5 273 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 PDXPQ96GD0 296 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 GFYI3L273 518 aa13.7□□□□□ -0.22
HMGA2-210ENST00000541363 HIST1H1DP16402 221 aaKnown RBP13.7□□□□□ -0.22
HMGA2-210ENST00000541363 HINT1P49773 126 aaPredicted RBP13.7□□□□□ -0.22
HMGA2-210ENST00000541363 IGKV6-21A0A0C4DH24 114 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 CDX4O14627 284 aaPredicted RBP13.69□□□□□ -0.22
HMGA2-210ENST00000541363 ST6GAL1P15907 406 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 CA10Q9NS85 328 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
HMGA2-210ENST00000541363 FAM90A27PA6NNH2 459 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 ALG1L2C9J202 215 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 RFLNAQ6ZTI6 216 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 BAHD1Q8TBE0 780 aaPredicted RBP13.69□□□□□ -0.22
HMGA2-210ENST00000541363 ADAMTS17Q8TE56 1095 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 TRAV38-1A0A0B4J264 116 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 SLC35E3Q7Z769 313 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 WDFY1Q8IWB7 410 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 TEX37Q96LM6 180 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 LIPGQ9Y5X9 500 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 ZFC3H1O60293 1989 aaKnown RBP13.69□□□□□ -0.22
HMGA2-210ENST00000541363 NDUFB6O95139 128 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 CD74P04233 296 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 STXBP6Q8NFX7 210 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 GMLQ99445 158 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 THAP10Q9P2Z0 257 aaPredicted RBP13.69□□□□□ -0.22
HMGA2-210ENST00000541363 SPAG17Q6Q759 2223 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 IGHV3-43A0A0B4J1X8 118 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 MED19A0JLT2 244 aaPredicted RBP13.69□□□□□ -0.22
HMGA2-210ENST00000541363 IGHV3-43DP0DP04 118 aa13.69□□□□□ -0.22
HMGA2-210ENST00000541363 FAM157CP0CG43 387 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 SIGIRRQ6IA17 410 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 EBLN2Q6P2I7 272 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 Q7L0L9 218 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 C16orf82Q7Z2V1 217 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 SCN3AQ9NY46 2000 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 MAS1LP35410 378 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 OR11G2Q8NGC1 345 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
HMGA2-210ENST00000541363 TBC1D29Q9UFV1 150 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 SMIM18P0DKX4 95 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 C12orf54Q6X4T0 127 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 YIPF6Q96EC8 236 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 TMUB1Q9BVT8 246 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 LRRC75AQ8NAA5 344 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 OR4X1Q8NH49 305 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 ZNF137PP52743 207 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 RAB32Q13637 225 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 PYCR3Q53H96 274 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 DLEU7Q6UYE1 221 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 ETFBKMTQ8IXQ9 262 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 C20orf27Q9GZN8 174 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 FGF17O60258 216 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 R3HDM4Q96D70 268 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 AQP10Q96PS8 301 aa13.68□□□□□ -0.22
HMGA2-210ENST00000541363 DHRS2Q13268 280 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms