RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 HMGB1P1B2RPK0 211 aaPredicted RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 ZNF593O00488 134 aaPredicted RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 XRCC3O43542 346 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 MMP23AO75900 390 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 IGLV1-40P01703 118 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 HIST1H1CP16403 213 aaKnown RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 RPS27P42677 84 aaKnown RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 NPBWR2P48146 333 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 RIPPLY1Q0D2K3 151 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 RIPK1Q13546 671 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 KIAA0141Q14154 515 aaPredicted RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 DLEU7Q6UYE1 221 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 KRT74Q7RTS7 529 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 LYG2Q86SG7 212 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 MOB3BQ86TA1 216 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 WFDC3Q8IUB2 231 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 OR10X1Q8NGY0 326 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 RP9Q8TA86 221 aaKnown RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 FANK1Q8TC84 345 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 FBLIM1Q8WUP2 373 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 TPD52L3Q96J77 140 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 EAF1Q96JC9 268 aaPredicted RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 ZNF488Q96MN9 340 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 S1PR3Q99500 378 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 NEURL2Q9BR09 285 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 IFT27Q9BW83 186 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 TINAGL1Q9GZM7 467 aaPredicted RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 FGF23Q9GZV9 251 aaPredicted RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 KLK15Q9H2R5 256 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 SRD5A3Q9H8P0 318 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 LGALS13Q9UHV8 139 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 ZNF107Q9UII5 783 aaPredicted RBP7.2□□□□□ -1.26
YBX3-211ENST00000541351 TP53TG1Q9Y2A0 90 aa7.2□□□□□ -1.26
YBX3-211ENST00000541351 DHRS12A0PJE2 317 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 TVP23AA6NH52 213 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 ANGPT2O15123 496 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 MAGEB3O15480 346 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 MOSP00540 346 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 NRASP01111 189 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 GAPDHP04406 335 aaKnown RBP7.19□□□□□ -1.26
YBX3-211ENST00000541351 H2BFMP0C1H6 154 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 PPIFP30405 207 aaKnown RBP7.19□□□□□ -1.26
YBX3-211ENST00000541351 CDC42P60953 191 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 ZNF45Q02386 682 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 BNIP1Q12981 228 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 SOHLH1Q5JUK2 328 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 PRSS45Q7RTY3 260 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 COMMD2Q86X83 199 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 SLC15A3Q8IY34 581 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 Q8IYB0 196 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 TCTEX1D1Q8N7M0 179 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 TPRX1Q8N7U7 411 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 RNF133Q8WVZ7 376 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 CORO2AQ92828 525 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 OVOL2Q9BRP0 275 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 THAP7Q9BT49 309 aaPredicted RBP7.19□□□□□ -1.26
YBX3-211ENST00000541351 ROPN1BQ9BZX4 212 aaPredicted RBP7.19□□□□□ -1.26
YBX3-211ENST00000541351 PKIBQ9C010 78 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 ROPN1Q9HAT0 212 aaPredicted RBP7.19□□□□□ -1.26
YBX3-211ENST00000541351 RANGRFQ9HD47 186 aaPredicted RBP7.19□□□□□ -1.26
YBX3-211ENST00000541351 DSCAML1Q8TD84 2053 aa7.19□□□□□ -1.26
YBX3-211ENST00000541351 HERC1Q15751 4861 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 TRAV41A0A0B4J266 112 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 ZNF729A6NN14 1252 aaPredicted RBP7.18□□□□□ -1.26
YBX3-211ENST00000541351 OR11H12B2RN74 326 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 J3QR06 171 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 E2F6O75461 281 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 HAND1O96004 215 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 TFAP2AP05549 437 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 MPZP25189 248 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 NFYBP25208 207 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 CRYBA2P53672 197 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 SLC18A1P54219 525 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 SELENOWP63302 87 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 PRR20EP86478 221 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 PRR20CP86479 221 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 PRR20DP86480 221 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 PRR20BP86481 221 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 PRR20AP86496 221 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.18□□□□□ -1.26
YBX3-211ENST00000541351 ZNF816Q0VGE8 651 aaPredicted RBP7.18□□□□□ -1.26
YBX3-211ENST00000541351 IL24Q13007 206 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 APOFQ13790 326 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 KRT71Q3SY84 523 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 MOGAT2Q3SYC2 334 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 LRRC23Q53EV4 343 aaPredicted RBP7.18□□□□□ -1.26
YBX3-211ENST00000541351 CYBRD1Q53TN4 286 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 TBPL2Q6SJ96 375 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 SHFQ7M4L6 423 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 RDH10Q8IZV5 341 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 GVQW1Q8N7I0 195 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 OR9G4Q8NGQ1 327 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 C2CD4CQ8TF44 421 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 CEP19Q96LK0 163 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 GGTLC1Q9BX51 225 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 CHST6Q9GZX3 395 aa7.18□□□□□ -1.26
YBX3-211ENST00000541351 ALX4Q9H161 411 aaPredicted RBP7.18□□□□□ -1.26
YBX3-211ENST00000541351 A0A0U1RQV5 110 aa7.17□□□□□ -1.26
YBX3-211ENST00000541351 TMEM82A0PJX8 343 aa7.17□□□□□ -1.26
YBX3-211ENST00000541351 FAM90A10PA6NDY2 464 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms