RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 SIRPDQ9H106 197 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 DNTTIP1Q9H147 329 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 NEK6Q9HC98 313 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 TNFRSF19Q9NS68 423 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 CKLFQ9UBR5 152 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 ZNF222Q9UK12 451 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 POLDIP2Q9Y2S7 368 aa11.72□□□□□ -0.53
LTBR-209ENST00000541102 TRDV1A0A1B0GX56 115 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 TMEM225BP0DP42 221 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 CD36P16671 472 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 PSMA1P25786 263 aaKnown RBP11.71□□□□□ -0.53
LTBR-209ENST00000541102 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.53
LTBR-209ENST00000541102 CFPP27918 469 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 DUSP1P28562 367 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 ZNF93P35789 620 aaPredicted RBP11.71□□□□□ -0.53
LTBR-209ENST00000541102 PTGFRP43088 359 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 SNU13P55769 128 aaKnown RBP11.71□□□□□ -0.53
LTBR-209ENST00000541102 PRB3Q04118 309 aaPredicted RBP11.71□□□□□ -0.53
LTBR-209ENST00000541102 PDCD1Q15116 288 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 TRAM1Q15629 374 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 C22orf42Q6IC83 251 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 METAP1DQ6UB28 335 aaPredicted RBP11.71□□□□□ -0.53
LTBR-209ENST00000541102 LY6G5BQ8NDX9 201 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 OR4D6Q8NGJ1 314 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 TNFAIP8L1Q8WVP5 186 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 GPER1Q99527 375 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 ZNF581Q9P0T4 197 aa11.71□□□□□ -0.53
LTBR-209ENST00000541102 SLC25A10Q9UBX3 287 aaPredicted RBP11.71□□□□□ -0.53
LTBR-209ENST00000541102 IGHV1-69DA0A0B4J2H0 117 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 SMIM30A4D0T7 59 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 RFPL4AA6NLU0 287 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 RFPL4AL1F8VTS6 287 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 GPR37O15354 613 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 SIGLEC5O15389 551 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 MAGEB3O15480 346 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 HOXA3O43365 443 aaPredicted RBP11.7□□□□□ -0.54
LTBR-209ENST00000541102 KDM4BO94953 1096 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 IGHV1-69P01742 117 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 TGFBR1P36897 503 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 COMPP49747 757 aaPredicted RBP11.7□□□□□ -0.54
LTBR-209ENST00000541102 CAPZA1P52907 286 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 BPIFB3P59826 476 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 ASCL4Q6XD76 172 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 NR2C2APQ86WQ0 139 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 MKXQ8IYA7 352 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 CMTM4Q8IZR5 234 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 JAGN1Q8N5M9 183 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 ZNRF1Q8ND25 227 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 TMEM185AQ8NFB2 350 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 PHYHIPQ92561 330 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 TAF15Q92804 592 aaKnown RBP eCLIP11.7□□□□□ -0.54
LTBR-209ENST00000541102 CYYR1Q96J86 154 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 CHCHD6Q9BRQ6 235 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 FAM192AQ9GZU8 254 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 KCNK15Q9H427 330 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 ZMAT3Q9HA38 289 aaKnown RBP11.7□□□□□ -0.54
LTBR-209ENST00000541102 ELL3Q9HB65 397 aaPredicted RBP11.7□□□□□ -0.54
LTBR-209ENST00000541102 TCF7L1Q9HCS4 588 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 SIRT7Q9NRC8 400 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 TXNL4BQ9NX01 149 aaKnown RBP11.7□□□□□ -0.54
LTBR-209ENST00000541102 RASL12Q9NYN1 266 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 STUB1Q9UNE7 303 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 AK6Q9Y3D8 172 aaKnown RBP11.7□□□□□ -0.54
LTBR-209ENST00000541102 MAB21L2Q9Y586 359 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 KPTNQ9Y664 436 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 TENM1Q9UKZ4 2725 aa11.7□□□□□ -0.54
LTBR-209ENST00000541102 A0A1W2PP11 408 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 A0A1W2PQ09 198 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 CLDN34H7C241 214 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 TFAP2AP05549 437 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 RNASE1P07998 156 aaKnown RBP11.69□□□□□ -0.54
LTBR-209ENST00000541102 HKR1P10072 659 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 CD37P11049 281 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 PRKACAP17612 351 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 OR10A3P58181 314 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 SMIM21Q3B7S5 101 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 AWAT1Q58HT5 328 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 SAXO1Q8IYX7 474 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 FAM58AQ8N1B3 248 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 ZSCAN4Q8NAM6 433 aaPredicted RBP11.69□□□□□ -0.54
LTBR-209ENST00000541102 EMG1Q92979 244 aaKnown RBP11.69□□□□□ -0.54
LTBR-209ENST00000541102 CENPOQ9BU64 300 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 HMG20AQ9NP66 347 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 EXOSC4Q9NPD3 245 aaKnown RBP11.69□□□□□ -0.54
LTBR-209ENST00000541102 OR14J1Q9UGF5 321 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 ING4Q9UNL4 249 aa11.69□□□□□ -0.54
LTBR-209ENST00000541102 LOC100506127A0A0U1RQW1 187 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 A0A1W2PRD5 423 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 A0A1W2PRF3 423 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 A0A1W2PRM7 423 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 PRDX2P32119 198 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 DLX1P56177 255 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 FOXL1Q12952 345 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 C16orf87Q6PH81 154 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 PXT1Q8NFP0 134 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 OR13F1Q8NGS4 319 aa11.68□□□□□ -0.54
LTBR-209ENST00000541102 THRSPQ92748 146 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms