RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 FAM90A18PA6NE21 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A16PA6NEW6 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 OR5H14A6NHG9 310 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A20PA6NIJ5 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A8PA6NJQ4 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A7PA6NKC0 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A22PA8MWA6 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A12PA8MX19 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A5PA8MXJ8 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A23PA8MXZ1 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 G3V3Q6 166 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 ERVH48-1M5A8F1 160 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 HS3ST1O14792 307 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 SIX6O95475 246 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 IFNA6P05013 189 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 OR4E1P0C645 316 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A15PP0C7V4 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A13PP0C7W8 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A14PP0C7W9 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A24PP0C7X0 464 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 PI3P19957 117 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 DTYMKP23919 212 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 GLRXP35754 106 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 ADORA2A-AS1P86434 159 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 ARL6IP1Q15041 203 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 ZFP69Q49AA0 526 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 Q5BKY6 102 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 C20orf204Q6ZNR8 217 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 TMEM230Q96A57 120 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 MED30Q96HR3 178 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 TMPRSS13Q9BYE2 586 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 TLNRD1Q9H1K6 362 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 CXXC4Q9H2H0 198 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 PPA2Q9H2U2 334 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 ANXA10Q9UJ72 324 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 COL6A6A6NMZ7 2263 aa10.38□□□□□ -0.75
AP003559.1-201ENST00000540906 PLCE1Q9P212 2302 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 FAM90A27PA6NNH2 459 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 SNRPGP15A8MWD9 76 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 CCL21O00585 134 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 FABP7O15540 132 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 TUBG1P23258 451 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 CDK10Q15131 360 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 MPV17LQ2QL34 196 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 CHRFAM7AQ494W8 412 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ACTBL2Q562R1 376 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF660Q6AZW8 331 aaPredicted RBP10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 SLC22A25Q6T423 547 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 WDR82Q6UXN9 313 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 UNQ6126/PRO20091Q6UXV3 157 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 NLRC3Q7RTR2 1065 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 OR2Z1Q8NG97 314 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 C5orf66Q9H5L9 145 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 TUBG2Q9NRH3 451 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 PLSCR3Q9NRY6 295 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 PIPOXQ9P0Z9 390 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 MGAT4CQ9UBM8 478 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 NOP16Q9Y3C1 178 aaKnown RBP10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 NBASA2RRP1 2371 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 NKX2-6A6NCS4 301 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 TMEM210A6NLX4 147 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 SIRPB1O00241 398 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 CREBL2O60519 120 aaPredicted RBP10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 NAPSAO96009 420 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 IGHV3-13P01766 116 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 GSTT2P0CG29 244 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 EGR1P18146 543 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 OR3A3P47888 321 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 BSPH1Q075Z2 132 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 IL13RA2Q14627 380 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ZMYND11Q15326 602 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 C4orf46Q504U0 113 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 DCAF12L2Q5VW00 463 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 TMEM211Q6ICI0 200 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 NOXA1Q86UR1 476 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 SLC25A42Q86VD7 318 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ZDHHC22Q8N966 263 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 POC1AQ8NBT0 407 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 TERB2Q8NHR7 220 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ZNF431Q8TF32 576 aaPredicted RBP10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ALX4Q9H161 411 aaPredicted RBP10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 HES4Q9HCC6 221 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 C12orf4Q9NQ89 552 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ING3Q9NXR8 418 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 GPR132Q9UNW8 380 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 NPTNQ9Y639 398 aa10.37□□□□□ -0.75
AP003559.1-201ENST00000540906 ICE1Q9Y2F5 2266 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 IGLV3-9A0A075B6K5 115 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 TRAV39A0A0B4J263 110 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 A6NLC8 198 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 ABCD4O14678 606 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 PRB1P04280 392 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 ZBTB25P24278 435 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 PMELP40967 661 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 TAS2R46P59540 309 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 TSPAN5P62079 268 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 DHRS2Q13268 280 aa10.36□□□□□ -0.75
AP003559.1-201ENST00000540906 IGSF11Q5DX21 431 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms