RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ZNF100Q8IYN0 542 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 SLC35G3Q8N808 338 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 TP53RKQ96S44 253 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 CDX2Q99626 313 aaPredicted RBP10.64□□□□□ -0.71
NPC1-202ENST00000540608 SRXN1Q9BYN0 137 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 C11orf1Q9H5F2 150 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 ZNF391Q9UJN7 358 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 PI4KAP42356 2102 aa10.64□□□□□ -0.71
NPC1-202ENST00000540608 IGHV1-45A0A0A0MS14 117 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 hCG_1809904A0A1W2PP81 198 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 A0A1W2PR64 198 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 A0A1W2PRV1 198 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 MPPED1O15442 326 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 FABP1P07148 127 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 TCN2P20062 427 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 PRSS12P56730 875 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 HERV-K104P61576 105 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 CLINT1Q14677 625 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 TMEM182Q6ZP80 229 aaPredicted RBP10.63□□□□□ -0.71
NPC1-202ENST00000540608 OR2C3Q8N628 320 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 FAM213BQ8TBF2 198 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 IMMP1LQ96LU5 166 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 JSRP1Q96MG2 331 aaPredicted RBP10.63□□□□□ -0.71
NPC1-202ENST00000540608 CRLF2Q9HC73 371 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 TMEM38BQ9NVV0 291 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 SLC7A11Q9UPY5 501 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 FREM2Q5SZK8 3169 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 C3orf85A0A1B0GTC6 90 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 GJE1A6NN92 205 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 CDS2O95674 445 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 ARG1P05089 322 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 OR13C7P0DN81 318 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 SRPXP78539 464 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 LYSMD4Q5XG99 296 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 Q6ZPA2 131 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 TCEAL3Q969E4 200 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 SH2D2AQ9NP31 389 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 GSN-AS1Q9NRJ2 163 aa10.63□□□□□ -0.71
NPC1-202ENST00000540608 TRDCB7Z8K6 153 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 G3V3Y1 287 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 DNPH1O43598 174 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 ZNF32P17041 273 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 PPP1CCP36873 323 aaKnown RBP10.62□□□□□ -0.71
NPC1-202ENST00000540608 EXT1Q16394 746 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 ADAM5Q6NVV9 412 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 MEX3BQ6ZN04 569 aaKnown RBP10.62□□□□□ -0.71
NPC1-202ENST00000540608 FAM185AQ8N0U4 392 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 AKR7LQ8NHP1 331 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 CPT1CQ8TCG5 803 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 ZNF700Q9H0M5 742 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 A0A1W2PPE2 198 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 MED19A0JLT2 244 aaPredicted RBP10.62□□□□□ -0.71
NPC1-202ENST00000540608 NKX2-6A6NCS4 301 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 FAM24AA6NFZ4 105 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 CBR3O75828 277 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 PPYP01298 95 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 FUT3P21217 361 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 NTF4P34130 210 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 NOVA1P51513 510 aaKnown RBP10.62□□□□□ -0.71
NPC1-202ENST00000540608 SSR4P51571 173 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 RAC3P60763 192 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 ZNF266Q14584 549 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 HLA-BQ31612 363 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 SOHLH1Q5JUK2 328 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 ZNF565Q8N9K5 539 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 NAXEQ8NCW5 288 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 RARRES2Q99969 163 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 TMEM222Q9H0R3 208 aa10.62□□□□□ -0.71
NPC1-202ENST00000540608 PTRH2Q9Y3E5 179 aaKnown RBP10.62□□□□□ -0.71
NPC1-202ENST00000540608 hCG_38984A0A1B0GV85 526 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 LINC00587B1AMM8 73 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 OR8U8P0C7N1 319 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 PATE4P0C8F1 98 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 HTR5AP47898 357 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 ASCL1P50553 236 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 RBM11P57052 281 aaKnown RBP10.61□□□□□ -0.71
NPC1-202ENST00000540608 PSG4Q00888 419 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 PDCD1Q15116 288 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 C1QL4Q86Z23 238 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 SUMF2Q8NBJ7 301 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 OR2G3Q8NGZ4 309 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 M1APQ8TC57 530 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 POM121Q96HA1 1249 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 YPEL4Q96NS1 127 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 AP4M1O00189 453 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 PITX3O75364 302 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 UMODP07911 640 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 FGF5P12034 268 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 COX6A1P12074 109 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 GNRHRP30968 328 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 NKX2-1P43699 371 aaPredicted RBP10.61□□□□□ -0.71
NPC1-202ENST00000540608 ZNF92Q03936 586 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 OR8G5Q8NG78 346 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 OR14L1PQ8NHC6 308 aa10.61□□□□□ -0.71
NPC1-202ENST00000540608 TCTEX1D2Q8WW35 142 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms