RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 CCDC121Q6ZUS5 278 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 UTS2BQ765I0 119 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 IL4I1Q96RQ9 567 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 SLC25A33Q9BSK2 321 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 GPR61Q9BZJ8 451 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 IL36RNQ9UBH0 155 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 HHLA2Q9UM44 414 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 POMPQ9Y244 141 aa9.58□□□□□ -0.88
CBX3P4-202ENST00000540428 A0A087X0M5 115 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 IGKV1-9A0A0C4DH69 117 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 LOC107986453A0A1B0GWG9 222 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 A0A1B0GX30 115 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 OOSP1A8MZH6 123 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 SH2D1BO14796 132 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 PRKACAP17612 351 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 BCL3P20749 454 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 PRKACBP22694 351 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 CDK2P24941 298 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 LMO1P25800 156 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 DUSP1P28562 367 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 EPHA2P29317 976 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 POU3F4P49335 361 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 MTCP1P56278 107 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 ISL1P61371 349 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 PRAMEF5Q5TYX0 476 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 TMEM244Q5VVB8 128 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 KDM4DQ6B0I6 523 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 LHFPL2Q6ZUX7 228 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 PRSS35Q8N3Z0 413 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 SPSB1Q96BD6 273 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 TBX5Q99593 518 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 GABARAPL1Q9H0R8 117 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 RHOFQ9HBH0 211 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 HMG20AQ9NP66 347 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 EXOSC4Q9NPD3 245 aaKnown RBP9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 INPP5EQ9NRR6 644 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 PCDHGB5Q9Y5G0 923 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 DSCAML1Q8TD84 2053 aa9.57□□□□□ -0.88
CBX3P4-202ENST00000540428 E9PQ18 207 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 G3V2T6 193 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 H3BSH0 61 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 BUB1B-PAK6H3BSN5 160 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 MITFO75030 526 aaPredicted RBP9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 OR2H2O95918 312 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 AMY1AP04745 511 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 AMY2AP04746 511 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 CSN2P05814 226 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 ATF1P18846 271 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 CD24P25063 80 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 MNDAP41218 407 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 PRRX1P54821 245 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 PDZK1IP1Q13113 114 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 HLA-DRB5Q30154 266 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 TPTE2P1Q5T6R2 138 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 CCDC144NLQ6NUI1 221 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 FAM220AQ7Z4H9 259 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 OSR2Q8N2R0 312 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 LINC00482Q8N8I6 264 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 OR10H4Q8NGA5 316 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 DPF1Q92782 380 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 ADAT3Q96EY9 351 aaPredicted RBP9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 COMMD4Q9H0A8 199 aa9.56□□□□□ -0.88
CBX3P4-202ENST00000540428 WI2-2373I1.2A0A1W2PRP0 233 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 ODAMA1E959 279 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 ZNF729A6NN14 1252 aaPredicted RBP9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 LY6LH3BQJ8 138 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 SIRPB1O00241 398 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 TOR1AO14656 332 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 KDM4BO94953 1096 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 ISG15P05161 165 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 SLC6A1P30531 599 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 ATP6V1E1P36543 226 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 PTGFRP43088 359 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 KIR3DL2P43630 455 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 KRTAP10-11P60412 298 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 DCTN2Q13561 401 aaKnown RBP9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 KPNB1Q14974 876 aaKnown RBP9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 ATP6AP1Q15904 470 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 DEFB121Q5J5C9 76 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 KHDC1LQ5JSQ8 128 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 BAIAP2L2Q6UXY1 529 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 THNSL2Q86YJ6 484 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 ZDHHC13Q8IUH4 622 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 RDH10Q8IZV5 341 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 CHST4Q8NCG5 386 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 OR51D1Q8NGF3 324 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 OR4D6Q8NGJ1 314 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 OR8J1Q8NGP2 316 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 RFKQ969G6 155 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 RNF166Q96A37 237 aaPredicted RBP9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 OPALINQ96PE5 141 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 MBOAT4Q96T53 435 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 ZNF286AQ9HBT8 521 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 PCDHB16Q9NRJ7 776 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 GSTK1Q9Y2Q3 226 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 MOB4Q9Y3A3 225 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 HSPE1-MOB4S4R3N1 261 aa9.55□□□□□ -0.88
CBX3P4-202ENST00000540428 IGKV1-12A0A0C4DH73 117 aa9.54□□□□□ -0.88
CBX3P4-202ENST00000540428 FAM90A18PA6NE21 464 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms