RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SLC35G3Q8N808 338 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 GLYATL2Q8WU03 294 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 THOC3Q96J01 351 aaKnown RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 ABHD14AQ9BUJ0 271 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 SLC7A10Q9NS82 523 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 TCFL5Q9UL49 500 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 SLC7A11Q9UPY5 501 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 FAM24AA6NFZ4 105 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 M0R036 132 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 HSD17B6O14756 317 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 GPR37O15354 613 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 CTSDP07339 412 aaPredicted RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 SCTP09683 121 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 BCL3P20749 454 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 ZNF133P52736 654 aaPredicted RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 HERV-K104P61576 105 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 HOXA4Q00056 320 aaPredicted RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 TMEM182Q6ZP80 229 aaPredicted RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 TUSC5Q8IXB3 177 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 C12orf49Q9H741 205 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 NAA60Q9H7X0 242 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 GPR35Q9HC97 309 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 LRFN1Q9P244 771 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 RCC2Q9P258 522 aaKnown RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 NOSIPQ9Y314 301 aaKnown RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 TECTAO75443 2155 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 DMXL2Q8TDJ6 3036 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CDRT15L2A8MXV6 281 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 HS3ST1O14792 307 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CST7O76096 145 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 TSPAN15O95858 294 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 JMJD7P0C870 316 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 OR13C7P0DN81 318 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 EPHA1P21709 976 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 POLR2GP62487 172 aaKnown RBP eCLIP11.79□□□□□ -0.527e-6■■■□□ 17
BNIP3-202ENST00000540159 MALLQ13021 153 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 UQCC3Q6UW78 93 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 RHBDD1Q8TEB9 315 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 C14orf79Q96F83 325 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 IP6K3Q96PC2 410 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 SIGLEC12Q96PQ1 595 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CDX2Q99626 313 aaPredicted RBP11.79□□□□□ -0.52
BNIP3-202ENST00000540159 KIAA1549Q9HCM3 1950 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 LILRA1O75019 489 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 MRPL33O75394 65 aaKnown RBP11.79□□□□□ -0.52
BNIP3-202ENST00000540159 IL32P24001 234 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CAMLGP49069 296 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CYB561P49447 251 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 ARF1P84077 181 aaKnown RBP11.79□□□□□ -0.52
BNIP3-202ENST00000540159 NAAAQ02083 359 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 OR2V1Q8NHB1 315 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CD300LFQ8TDQ1 290 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 RDH5Q92781 318 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 PRRG4Q9BZD6 226 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 ZDHHC8Q9ULC8 765 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 TIMM10BQ9Y5J6 103 aa11.79□□□□□ -0.52
BNIP3-202ENST00000540159 CADP27708 2225 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 NKX2-6A6NCS4 301 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 LAMTOR5O43504 91 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 SNAPINO95295 136 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 HIST1H3AP68431 136 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 ZXDAP98168 799 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 TMEM187Q14656 261 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 KRBOX4Q5JUW0 171 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 HIST2H3PS2Q5TEC6 136 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 HIST2H3AQ71DI3 136 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 FAM213BQ8TBF2 198 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 M1APQ8TC57 530 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 CT55Q8WUE5 264 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 IL1F10Q8WWZ1 152 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 SPSB1Q96BD6 273 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 KIRREL1Q96J84 757 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 SSSCA1O60232 199 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 CST4P01036 141 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 SELEP16581 610 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 SRD5A2P31213 254 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 ALDH3B1P43353 468 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 BCO1Q9HAY6 547 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 ATMQ13315 3056 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 hCG_38984A0A1B0GV85 526 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 APOC1P02654 83 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 ARG1P05089 322 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 MAGEA5P43359 124 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 TLE1Q04724 770 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 PPA1Q15181 289 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 NTNG2Q96CW9 530 aa11.78□□□□□ -0.52
BNIP3-202ENST00000540159 PPP1CCP36873 323 aaKnown RBP11.77□□□□□ -0.53
BNIP3-202ENST00000540159 PLA2G5P39877 138 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 GLP1RP43220 463 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 PEA15Q15121 130 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 ZNF239Q16600 458 aaKnown RBP11.77□□□□□ -0.53
BNIP3-202ENST00000540159 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
BNIP3-202ENST00000540159 P4HA3Q7Z4N8 544 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 EXTL1Q92935 676 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 SMIM8Q96KF7 97 aa11.77□□□□□ -0.53
BNIP3-202ENST00000540159 UBE2J1Q9Y385 318 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms