RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 BAMBIQ13145 260 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 DDI2Q5TDH0 399 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 HCP5Q6MZN7 132 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 Q6P435 159 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 FIP1L1Q6UN15 594 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 ASCL4Q6XD76 172 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 TCF23Q7RTU1 214 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 PNKDQ8N490 385 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 TPRX1Q8N7U7 411 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 PXT1Q8NFP0 134 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 OR10K1Q8NGX5 313 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 ZFAND2BQ8WV99 257 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 DERL3Q96Q80 235 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 METTL8Q9H825 291 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 UNKLQ9H9P5 680 aaKnown RBP14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 RHOFQ9HBH0 211 aa14.98□□□□□ -0.01
SNRPA1-203ENST00000540017 A0A0U1RQK1 487 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 TRIM77I1YAP6 450 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 SH2D1BO14796 132 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 RGS10O43665 173 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 CDRT1O95170 752 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 FSTP19883 344 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 TGFBR2P37173 567 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 PTGFRP43088 359 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 OR3A1P47881 315 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 EDDM3BP56851 147 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 EDDM3AQ14507 147 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 MED22Q15528 200 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 SLC9A3R2Q15599 337 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 GRK1Q15835 563 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 ELP2Q6IA86 826 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 GDPD3Q7L5L3 318 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 OR5D13Q8NGL4 314 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 FAM216AQ8WUB2 273 aa14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 EXOSC4Q9NPD3 245 aaKnown RBP14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 RRP15Q9Y3B9 282 aaKnown RBP14.97□□□□□ -0.01
SNRPA1-203ENST00000540017 LMO1P25800 156 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 ZNF93P35789 620 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 MAP2K4P45985 399 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 GP2P55259 537 aaKnown RBP14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 SCN1BQ07699 218 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 BLMHQ13867 455 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 Q8NFD4 153 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 ZNF184Q99676 751 aaPredicted RBP14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 FAM192AQ9GZU8 254 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 NOX4Q9NPH5 578 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 GLS2Q9UI32 602 aa14.96□□□□□ -0.01
SNRPA1-203ENST00000540017 DSCAML1Q8TD84 2053 aa14.96□□□□□ -0.02
SNRPA1-203ENST00000540017 A0A0G2JK05 382 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 HOXA3O43365 443 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 MTNR1BP49286 362 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 RBM48Q5RL73 367 aaKnown RBP14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 FAM27D1Q5T7N8 215 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 UNQ9370/PRO34162Q6UXP9 181 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 Q6YL49 198 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 PRSS48Q7RTY5 328 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 TBC1D15Q8TC07 691 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 CPNE2Q96FN4 548 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 NR1H4Q96RI1 486 aaPredicted RBP14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 TMED9Q9BVK6 235 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 CCDC90BQ9GZT6 254 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 ZNF581Q9P0T4 197 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 ING4Q9UNL4 249 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 FOXJ3Q9UPW0 622 aa14.95□□□□□ -0.02
SNRPA1-203ENST00000540017 C17orf98A8MV24 154 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 SLC33A1O00400 549 aaPredicted RBP14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 MGST3O14880 152 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 NPFFO15130 113 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 HTR3BO95264 441 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 MAS1P04201 325 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 MELTFP08582 738 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 ZNF44P15621 663 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 UBE2E1P51965 193 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 GUCA2AQ02747 115 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 RSU1Q15404 277 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 PIGYQ3MUY2 71 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 ACSM3Q53FZ2 586 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 LIPKQ5VXJ0 399 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 NCR3LG1Q68D85 454 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 LYPD6Q86Y78 171 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 OR51T1Q8NGJ9 327 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 ZDHHC16Q969W1 377 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 PPA2Q9H2U2 334 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 CKLFQ9UBR5 152 aa14.94□□□□□ -0.02
SNRPA1-203ENST00000540017 A0A1W2PPH5 198 aa14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 CLDN34H7C241 214 aa14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 DEGS1O15121 323 aa14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 ZNF728P0DKX0 622 aa14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 MEF2CQ06413 473 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 ZNF782Q6ZMW2 699 aaPredicted RBP14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 C17orf50Q8WW18 174 aa14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 TAF15Q92804 592 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 AJUBAQ96IF1 538 aa14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 PPIL3Q9H2H8 161 aaKnown RBP14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 TNFRSF19Q9NS68 423 aa14.93□□□□□ -0.02
SNRPA1-203ENST00000540017 TRAV24A0A0B4J272 114 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 A0A1W2PP11 408 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 DENRO43583 198 aaKnown RBP14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 SC5DO75845 299 aa14.92□□□□□ -0.02
SNRPA1-203ENST00000540017 RNASE1P07998 156 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms