RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CHMP1AQ9HD42 196 aaPredicted RBP19.08■□□□□ 0.65
HOMER3-204ENST00000539827 OR5H14A6NHG9 310 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 PRSS44E7EML9 344 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 F5H5P2 479 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 H3BUI4 141 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 HLA-AP01891 365 aaKnown RBP19.08■□□□□ 0.64
HOMER3-204ENST00000539827 CCKARP32238 428 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 BAMBIQ13145 260 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 GRK1Q15835 563 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 OR11H4Q8NGC9 324 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 OR2T35Q8NGX2 323 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 HYLS1Q96M11 299 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 RANBP3Q9H6Z4 567 aaPredicted RBP19.08■□□□□ 0.64
HOMER3-204ENST00000539827 C12orf4Q9NQ89 552 aa19.08■□□□□ 0.64
HOMER3-204ENST00000539827 RCC2Q9P258 522 aaKnown RBP19.08■□□□□ 0.64
HOMER3-204ENST00000539827 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.07■□□□□ 0.64
HOMER3-204ENST00000539827 CRYAAP02489 173 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 PI3P19957 117 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 Q5BKY6 102 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 LYG2Q86SG7 212 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 LRP11Q86VZ4 500 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 NEK7Q8TDX7 302 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 ZNF2Q9BSG1 426 aaPredicted RBP19.07■□□□□ 0.64
HOMER3-204ENST00000539827 GON7Q9BXV9 100 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 CXXC4Q9H2H0 198 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 ZNF286AQ9HBT8 521 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 POLDIP2Q9Y2S7 368 aa19.07■□□□□ 0.64
HOMER3-204ENST00000539827 MAP1BP46821 2468 aaKnown RBP19.07■□□□□ 0.64
HOMER3-204ENST00000539827 TMEM210A6NLX4 147 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 HS3ST1O14792 307 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 DNASE1P24855 282 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 FPR2P25090 351 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 IL13RA2Q14627 380 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 C3orf36Q3SXR2 165 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 SUMF2Q8NBJ7 301 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 GRPEL2Q8TAA5 225 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 C5orf66Q9H5L9 145 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 MGAT4AQ9UM21 535 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 C9orf170A2RU37 121 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 MCRIP1C9JLW8 97 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 SLC22A5O76082 557 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 ZNF205O95201 554 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 OR5H8P0DN80 308 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 CD34P28906 385 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 KLRB1Q12918 225 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 LAMTOR1Q6IAA8 161 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 VHLLQ6RSH7 139 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 LINC00596Q86U02 117 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 C1orf174Q8IYL3 243 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 TMPRSS13Q9BYE2 586 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 NECAP2Q9NVZ3 263 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 DUSP13Q9UII6 198 aa19.06■□□□□ 0.64
HOMER3-204ENST00000539827 GIPP09681 153 aaPredicted RBP19.05■□□□□ 0.64
HOMER3-204ENST00000539827 VAMP1P23763 118 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 SNRPD2P62316 118 aaKnown RBP19.05■□□□□ 0.64
HOMER3-204ENST00000539827 DCAF12L2Q5VW00 463 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 PRAMEF6Q5VXH4 476 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 LIN54Q6MZP7 749 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 ZNF826PQ6ZT77 177 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 CASTOR1Q8WTX7 329 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 GTF3AQ92664 365 aaKnown RBP19.05■□□□□ 0.64
HOMER3-204ENST00000539827 RDH5Q92781 318 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 TMEM230Q96A57 120 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 RTBDNQ9BSG5 229 aaPredicted RBP19.05■□□□□ 0.64
HOMER3-204ENST00000539827 ELOVL5Q9NYP7 299 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 SPEF1Q9Y4P9 236 aa19.05■□□□□ 0.64
HOMER3-204ENST00000539827 RP1L1Q8IWN7 2480 aaPredicted RBP19.05■□□□□ 0.64
HOMER3-204ENST00000539827 TRAV24A0A0B4J272 114 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 TRGV8A0A0C4DH27 118 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 CEACAM18A8MTB9 384 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 ATP6V1G2-DDX39BF2Z307 99 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 G3V3Q6 166 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 C16orf97H3BN30 126 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 OR2A4O95047 310 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 PGA5P0DJD9 388 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 PGAM2P15259 253 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 H2BFSP57053 126 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 ERVK11-1P61568 191 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 IL13RA1P78552 427 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 C11orf88Q6PI97 169 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 C5orf24Q7Z6I8 188 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 PEG10Q86TG7 708 aaKnown RBP19.04■□□□□ 0.64
HOMER3-204ENST00000539827 C11orf53Q8IXP5 236 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 SCGB3A2Q96PL1 93 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 OR2A7Q96R45 310 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 LIME1Q9H400 295 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 CACNA1AO00555 2505 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 DSPP15924 2871 aaKnown RBP19.04■□□□□ 0.64
HOMER3-204ENST00000539827 DEGS1O15121 323 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 ZNF44P15621 663 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 GLRA1P23415 457 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 TAS2R31P59538 309 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 FAHD2BQ6P2I3 314 aaPredicted RBP19.04■□□□□ 0.64
HOMER3-204ENST00000539827 Q6P435 159 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 FAHD2AQ96GK7 314 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 NRIP2Q9BQI9 281 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 WDR13Q9H1Z4 485 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 JKAMPQ9P055 326 aa19.04■□□□□ 0.64
HOMER3-204ENST00000539827 NXPH2O95156 264 aa19.03■□□□□ 0.64
HOMER3-204ENST00000539827 C9orf62Q8N4C0 152 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms