RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 OR10A3P58181 314 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 GMFBP60983 142 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 GPR176Q14439 515 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 ZNF273Q14593 569 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 RAB11BQ15907 218 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 ZNF404Q494X3 552 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 Q5PR19 223 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 GLIPR1L1Q6UWM5 242 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 OR4D6Q8NGJ1 314 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 MCFD2Q8NI22 146 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 NRIP2Q9BQI9 281 aa12.96□□□□□ -0.33
DDB1-216ENST00000539739 TRAV38-1A0A0B4J264 116 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 IGKV1-12A0A0C4DH73 117 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 SMIM30A4D0T7 59 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 IFITM5A6NNB3 132 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 LGALS8O00214 317 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 SLC22A5O76082 557 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 KDM4BO94953 1096 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 IGKV1D-12P01611 117 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 CSTBP04080 98 aaKnown RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 UBBP0CG47 229 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 ZP3P21754 424 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 ART1P52961 327 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 BTG1P62324 171 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 HNRNPA0Q13151 305 aaKnown RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 MICBQ29980 383 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 SMIM21Q3B7S5 101 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 Q5BKY6 102 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 ASCL4Q6XD76 172 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 C1QL2Q7Z5L3 287 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 C10orf105Q8TEF2 133 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 ZNF488Q96MN9 340 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 STEAP1Q9UHE8 339 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 WIPI2Q9Y4P8 454 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 TANC2Q9HCD6 1990 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 CSMD2Q7Z408 3487 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 OOEPA6NGQ2 149 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 C3orf80F5H4A9 247 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 AIPO00170 330 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 ZNF205O95201 554 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 FSTL3O95633 263 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 MUC1P15941 1255 aaPredicted RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 SPNP16150 400 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 EGR1P18146 543 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 BCL3P20749 454 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 CD80P33681 288 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 RBMXP38159 391 aaKnown RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 RPS19P39019 145 aaKnown RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 MDH2P40926 338 aaKnown RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 NPBWR2P48146 333 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 CAPZA1P52907 286 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 ERVK11-1P61568 191 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 FAM201AQ5SY85 155 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 HES5Q5TA89 166 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 SFRP4Q6FHJ7 346 aaPredicted RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 FAM58AQ8N1B3 248 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 BATF2Q8N1L9 274 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 MUC20Q8N307 709 aaPredicted RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 EMG1Q92979 244 aaKnown RBP12.95□□□□□ -0.34
DDB1-216ENST00000539739 WDR13Q9H1Z4 485 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 DCSTAMPQ9H295 470 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 PLSCR3Q9NRY6 295 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 IL36GQ9NZH8 169 aa12.95□□□□□ -0.34
DDB1-216ENST00000539739 WNT9BO14905 357 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 HTR3BO95264 441 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 ARSBP15848 533 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 SLC25A16P16260 332 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 CAV3P56539 151 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 CLLU1Q5K131 121 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 AVPI1Q5T686 147 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 TEX36Q5VZQ5 186 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 FAM166AQ6J272 317 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 SFXN4Q6P4A7 337 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 DNM1P46Q6ZS02 220 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 NR2C2APQ86WQ0 139 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 CCDC168Q8NDH2 2452 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 DEFB108BQ8NET1 73 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 C12orf57Q99622 126 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 HES4Q9HCC6 221 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 RBFOX1Q9NWB1 397 aaKnown RBP12.94□□□□□ -0.34
DDB1-216ENST00000539739 NLKQ9UBE8 527 aa12.94□□□□□ -0.34
DDB1-216ENST00000539739 ELF5Q9UKW6 265 aaPredicted RBP12.94□□□□□ -0.34
DDB1-216ENST00000539739 A0A0G2JK05 382 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 TMEM127O75204 238 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 BPNT1O95861 308 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 IGHV2-70P01814 119 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 SFTPBP07988 381 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 SERPINA2P20848 420 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 CFPP27918 469 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 ZMYND11Q15326 602 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 P2RY14Q15391 338 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 AANATQ16613 207 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 ELP2Q6IA86 826 aa12.93□□□□□ -0.34
DDB1-216ENST00000539739 LRRC28Q86X40 367 aaPredicted RBP12.93□□□□□ -0.34
DDB1-216ENST00000539739 C19orf18Q8NEA5 215 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms