RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TGIF2LYQ8IUE0 185 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 GPX8Q8TED1 209 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 SULT4A1Q9BR01 284 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 FAAP24Q9BTP7 215 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 SPACA1Q9HBV2 294 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 KLK11Q9UBX7 282 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 CACNG2Q9Y698 323 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 LINC00854A0A1B0GVQ3 168 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 UBE2QL1A1L167 161 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.58□□□□□ -0.23
TRAF3-204ENST00000539721 ORC5O43913 435 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 RBBP9O75884 186 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 HAND1O96004 215 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 FAM90A1Q86YD7 464 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 CCL17Q92583 94 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 IFT22Q9H7X7 185 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 DCAF16Q9NXF7 216 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 RCC2Q9P258 522 aaKnown RBP13.58□□□□□ -0.23
TRAF3-204ENST00000539721 NLKQ9UBE8 527 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 WIPI2Q9Y4P8 454 aa13.58□□□□□ -0.23
TRAF3-204ENST00000539721 IGHV3OR15-7A0A075B7D8 119 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 IGHV1-69-2A0A0G2JMI3 117 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 H7C417 338 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 SIRPB1O00241 398 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 OR2H2O95918 312 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 CEBPDP49716 269 aaPredicted RBP13.58□□□□□ -0.24
TRAF3-204ENST00000539721 FAM201AQ5SY85 155 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 C1orf87Q8N0U7 546 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 SUMF2Q8NBJ7 301 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 NEK7Q8TDX7 302 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 MTFP1Q9UDX5 166 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 AK3Q9UIJ7 227 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 PLEKHA6Q9Y2H5 1048 aa13.58□□□□□ -0.24
TRAF3-204ENST00000539721 RBMX2Q9Y388 322 aaKnown RBP13.58□□□□□ -0.24
TRAF3-204ENST00000539721 ISPDA4D126 451 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 RFPL4AA6NLU0 287 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 MCRIP1C9JLW8 97 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 RFPL4AL1F8VTS6 287 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 IFNL4K9M1U5 179 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 HSPB6O14558 160 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 SSX5O60225 188 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 CA11O75493 328 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 DEFA1P59665 94 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 DEFA3P59666 94 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 MRPS15P82914 257 aaKnown RBP13.57□□□□□ -0.24
TRAF3-204ENST00000539721 SFRP4Q6FHJ7 346 aaPredicted RBP13.57□□□□□ -0.24
TRAF3-204ENST00000539721 TOMM5Q8N4H5 51 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 OR5T2Q8NGG2 359 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 DYRK2Q92630 601 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 RDH5Q92781 318 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 TMEM106BQ9NUM4 274 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 LRRK2Q5S007 2527 aa13.57□□□□□ -0.24
TRAF3-204ENST00000539721 DSCAMO60469 2012 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 SPTAN1Q13813 2472 aaKnown RBP13.56□□□□□ -0.24
TRAF3-204ENST00000539721 TRAV24A0A0B4J272 114 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 OR2AT4A6NND4 320 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 TMEM178BH3BS89 294 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 SLC33A1O00400 549 aaPredicted RBP13.56□□□□□ -0.24
TRAF3-204ENST00000539721 ZNF205O95201 554 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 FCER2P06734 321 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 GSTT2BP0CG30 244 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 PSG2P11465 335 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 CDKN1AP38936 164 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 ACTBP60709 375 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 ACTG1P63261 375 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 SSBP1Q04837 148 aaKnown RBP13.56□□□□□ -0.24
TRAF3-204ENST00000539721 PAN3Q58A45 887 aaKnown RBP13.56□□□□□ -0.24
TRAF3-204ENST00000539721 C20orf204Q6ZNR8 217 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 DCDC5Q6ZRR9 648 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 BPIFB2Q8N4F0 458 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 POC5Q8NA72 575 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 NEU4Q8WWR8 484 aaPredicted RBP13.56□□□□□ -0.24
TRAF3-204ENST00000539721 CMSS1Q9BQ75 279 aaKnown RBP13.56□□□□□ -0.24
TRAF3-204ENST00000539721 DPCDQ9BVM2 203 aaPredicted RBP13.56□□□□□ -0.24
TRAF3-204ENST00000539721 PLEKHF2Q9H8W4 249 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 IFT46Q9NQC8 304 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 TBC1D24Q9ULP9 559 aa13.56□□□□□ -0.24
TRAF3-204ENST00000539721 ECDO95905 644 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-204ENST00000539721 TFF1P04155 84 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 CBX5P45973 191 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 RBM39Q14498 530 aaKnown RBP13.55□□□□□ -0.24
TRAF3-204ENST00000539721 MICBQ29980 383 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 HFEQ30201 348 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 HDHD3Q9BSH5 251 aaPredicted RBP13.55□□□□□ -0.24
TRAF3-204ENST00000539721 COL12A1Q99715 3063 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 IGKV1D-17A0A075B6S4 117 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 OOEPA6NGQ2 149 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 GLAP06280 429 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 CSF1P09603 554 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 PRDX2P32119 198 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 RCVRNP35243 200 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 GABRA2P47869 451 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 AP3S2P59780 193 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 RGS21Q2M5E4 152 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 TEX36Q5VZQ5 186 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 CD177Q8N6Q3 437 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 GVQW1Q8N7I0 195 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 DEFB108BQ8NET1 73 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 SETD6Q8TBK2 473 aa13.55□□□□□ -0.24
TRAF3-204ENST00000539721 COX4I2Q96KJ9 171 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms