RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 SIRT7Q9NRC8 400 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 DKKL1Q9UK85 242 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 FBXO7Q9Y3I1 522 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF816-ZNF321PA0A0X1KG74 233 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 ZIC3O60481 467 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 OR2C1O95371 312 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 HSPB1P04792 205 aaKnown RBP11.48□□□□□ -0.57
UBE3B-209ENST00000539584 CTXN2P0C2S0 81 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 OR8U8P0C7N1 319 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 CEACAM1P13688 526 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 RBM11P57052 281 aaKnown RBP11.48□□□□□ -0.57
UBE3B-209ENST00000539584 RIPPLY2Q5TAB7 128 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 TMEM182Q6ZP80 229 aaPredicted RBP11.48□□□□□ -0.57
UBE3B-209ENST00000539584 SLC16A13Q7RTY0 426 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 OR2G3Q8NGZ4 309 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 KCNE4Q8WWG9 221 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 IL22RA2Q969J5 263 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 SH3BGRL3Q9H299 93 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 TMEM38BQ9NVV0 291 aa11.48□□□□□ -0.57
UBE3B-209ENST00000539584 IGHV5-10-1A0A0J9YXX1 117 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 FHITP49789 147 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 CLDN15P56746 228 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 NRN1LQ496H8 165 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 RBMS3Q6XE24 437 aaKnown RBP11.47□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF695Q8IW36 515 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF700Q9H0M5 742 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 SH2D2AQ9NP31 389 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 UNC13CQ8NB66 2214 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 hCG_38984A0A1B0GV85 526 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 TK1P04183 234 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 FGF5P12034 268 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 MYF5P13349 255 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 AADACP22760 399 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 ATP6V0CP27449 155 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 SSR4P51571 173 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 RPS23P62266 143 aaKnown RBP11.47□□□□□ -0.57
UBE3B-209ENST00000539584 VAMP2P63027 116 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 TLE4Q04727 773 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 IL11RAQ14626 422 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 SP5Q6BEB4 398 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-209ENST00000539584 SAXO1Q8IYX7 474 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 IMMP1LQ96LU5 166 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 UCN2Q96RP3 112 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 TP53RKQ96S44 253 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 C20orf24Q9BUV8 137 aa11.47□□□□□ -0.57
UBE3B-209ENST00000539584 PHF7Q9BWX1 381 aaPredicted RBP11.47□□□□□ -0.57
UBE3B-209ENST00000539584 IGHV1-45A0A0A0MS14 117 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 IGKV1-12A0A0C4DH73 117 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 hCG_1809904A0A1W2PP81 198 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 A0A1W2PPE3 182 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 A0A1W2PR64 198 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 A0A1W2PRV1 198 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 LINC00587B1AMM8 73 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 B4DEV8 164 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 RPL36A-HNRNPH2H7BZ11 118 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 WRBO00258 174 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 TGOLN2O43493 480 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 IGKV1D-12P01611 117 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 HOXA5P20719 270 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 VDAC1P21796 283 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
UBE3B-209ENST00000539584 PIGYQ3MUY2 71 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 TSPO2Q5TGU0 170 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF774Q6NX45 483 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 CLEC9AQ6UXN8 241 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 TMEM252Q8N6L7 170 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 OR13D1Q8NGV5 346 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 OR2AE1Q8NHA4 323 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 SPSB4Q96A44 273 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 MUCL1Q96DR8 90 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 ZNF442Q9H7R0 627 aa11.46□□□□□ -0.57
UBE3B-209ENST00000539584 UBE2J1Q9Y385 318 aaPredicted RBP11.46□□□□□ -0.57
UBE3B-209ENST00000539584 GON4LQ3T8J9 2241 aa11.46□□□□□ -0.58
UBE3B-209ENST00000539584 A0A0J9YW62 118 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 KIR2DS1A0A191URI9 304 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 A0A1W2PPE2 198 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 C1QL1O75973 258 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 ARG1P05089 322 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 OR13C7P0DN81 318 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 NQO2P16083 231 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 CBR1P16152 277 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 GNRHRP30968 328 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 PPP1CCP36873 323 aaKnown RBP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 KIR2DS4P43632 304 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 HTR5AP47898 357 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 ID3Q02535 119 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 MYO9BQ13459 2157 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 KIR2DS1Q14954 304 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 SLC35E3Q7Z769 313 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 SPEM1Q8N4L4 309 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 SGCZQ96LD1 299 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 CRLF2Q9HC73 371 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 PARPBPQ9NWS1 579 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 MIOXQ9UGB7 285 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 CA14Q9ULX7 337 aa11.45□□□□□ -0.58
UBE3B-209ENST00000539584 NCOA6Q14686 2063 aaPredicted RBP11.45□□□□□ -0.58
UBE3B-209ENST00000539584 UNC80Q8N2C7 3258 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms