RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FCGR3AP08637 254 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF728P0DKX0 622 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF32P17041 273 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF468Q5VIY5 522 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-207ENST00000538862 HAGHLQ6PII5 290 aaPredicted RBP12.59□□□□□ -0.39
CDCA3-207ENST00000538862 EXTL1Q92935 676 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 HRH4Q9H3N8 390 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 BCO1Q9HAY6 547 aa12.59□□□□□ -0.39
CDCA3-207ENST00000538862 ZNF850A8MQ14 1090 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 FCGR2CP31995 323 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 NTF4P34130 210 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 FUT6P51993 359 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 PIGPP57054 158 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 PCBD1P61457 104 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 HGFACQ04756 655 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 RIPPLY2Q5TAB7 128 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 AAED1Q7RTV5 226 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 YRDCQ86U90 279 aaKnown RBP12.58□□□□□ -0.39
CDCA3-207ENST00000538862 GGNQ86UU5 652 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 FOXRED2Q8IWF2 684 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 OSR2Q8N2R0 312 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 LRTM2Q8N967 370 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 CT55Q8WUE5 264 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 MRPL24Q96A35 216 aaKnown RBP12.58□□□□□ -0.39
CDCA3-207ENST00000538862 POM121Q96HA1 1249 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 TECTBQ96PL2 329 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 LIME1Q9H400 295 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 PARP11Q9NR21 331 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 POMT1Q9Y6A1 747 aa12.58□□□□□ -0.39
CDCA3-207ENST00000538862 CFAP46Q8IYW2 2715 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 TCN2P20062 427 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 PMELP40967 661 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 HTR5AP47898 357 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 RRADP55042 308 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 FAM3AP98173 230 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 PSG4Q00888 419 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 LY6DQ14210 128 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 TMEM187Q14656 261 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 ABLIM2Q6H8Q1 611 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 OR2A2Q6IF42 318 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 BTNL8Q6UX41 500 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 OR14L1PQ8NHC6 308 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 NRIP2Q9BQI9 281 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 SULT4A1Q9BR01 284 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 SUCNR1Q9BXA5 334 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 NAA60Q9H7X0 242 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 ZFP57Q9NU63 452 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 RCC2Q9P258 522 aaKnown RBP12.58□□□□□ -0.4
CDCA3-207ENST00000538862 SLC7A11Q9UPY5 501 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 AMDHD2Q9Y303 409 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 PRELID3BQ9Y3B1 194 aa12.58□□□□□ -0.4
CDCA3-207ENST00000538862 MRPS18CQ9Y3D5 142 aaKnown RBP12.58□□□□□ -0.4
CDCA3-207ENST00000538862 hCG_38984A0A1B0GV85 526 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 E5RGE8 158 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 MED6O75586 246 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 LPAR6P43657 344 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 UCP3P55916 312 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 TMEM33P57088 247 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 RPS18P62269 152 aaKnown RBP12.57□□□□□ -0.4
CDCA3-207ENST00000538862 HFEQ30201 348 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 ABCA11PQ4W5N1 156 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 ANKRD39Q53RE8 183 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 UBAC2Q8NBM4 344 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 OR10AD1Q8NGE0 317 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 ADGRG7Q96K78 797 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 FOXB1Q99853 325 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 OR2H1Q9GZK4 316 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 FBXL17Q9UF56 701 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 NSG2Q9Y328 171 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 TLN1Q9Y490 2541 aaKnown RBP12.57□□□□□ -0.4
CDCA3-207ENST00000538862 BSNQ9UPA5 3926 aa12.57□□□□□ -0.4
CDCA3-207ENST00000538862 GEMIN2O14893 280 aaKnown RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 CD5P06127 495 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 B4GALT1P15291 398 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 MUC1P15941 1255 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 OPRM1P35372 400 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 PDZK1IP1Q13113 114 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 TMEM88Q6PEY1 159 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 OR2V1Q8NHB1 315 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 AKR7LQ8NHP1 331 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 RTN4IP1Q8WWV3 396 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 SYT3Q9BQG1 590 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 WNT5BQ9H1J7 359 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 TMEM231Q9H6L2 316 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 ZNF286AQ9HBT8 521 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 LSM5Q9Y4Y9 91 aaKnown RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 IGKV1-12A0A0C4DH73 117 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 A0A0G2JMM0 328 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 A0A1W2PPB8 328 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 A0A1W2PRS3 328 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 ZNF891A8MT65 544 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 KIR3DP1A8MWS1 328 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 RNASEK-C17orf49H0YIS7 233 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 H7C1Q1 480 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 ATXN7O15265 892 aaPredicted RBP12.56□□□□□ -0.4
CDCA3-207ENST00000538862 CXCL13O43927 109 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 IGKV1D-12P01611 117 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 HEXAP06865 529 aa12.56□□□□□ -0.4
CDCA3-207ENST00000538862 SFTPCP11686 197 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms