RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TMEM211Q6ICI0 200 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 MCEMP1Q8IX19 187 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 EXTL1Q92935 676 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 APOBEC3DQ96AK3 386 aaPredicted RBP21.41■■□□□ 1.02
RAB40C-204ENST00000538492 OR51B6Q9H340 312 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 LOC400499M0QZD8 3231 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 LRP3O75074 770 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 GLP1RP43220 463 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 UQCC3Q6UW78 93 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 ZDHHC23Q8IYP9 409 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 MOB3AQ96BX8 217 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 PRRX2Q99811 253 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 ARHGAP21Q5T5U3 1957 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 ZNF732B4DXR9 585 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 NOVA1P51513 510 aaKnown RBP21.4■■□□□ 1.02
RAB40C-204ENST00000538492 CLEC9AQ6UXN8 241 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 IL22RA1Q8N6P7 574 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 ARL11Q969Q4 196 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 GALNT14Q96FL9 552 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 ZNF552Q9H707 407 aaPredicted RBP21.4■■□□□ 1.02
RAB40C-204ENST00000538492 PRSS50Q9UI38 385 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 ASPMQ8IZT6 3477 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 ZNF724A8MTY0 619 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 ABCD4O14678 606 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 DIRAS3O95661 229 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 HERV-K104P61576 105 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 CEACAM21Q3KPI0 293 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 LHFPL5Q8TAF8 219 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 DEFB127Q9H1M4 99 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 LPAR3Q9UBY5 353 aa21.4■■□□□ 1.02
RAB40C-204ENST00000538492 DUSP1P28562 367 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-204ENST00000538492 GLYATL2Q8WU03 294 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 MTCH1Q9NZJ7 389 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 FBXL17Q9UF56 701 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 TMEM218A2RU14 115 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 NME2P1O60361 137 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 MBPP02686 304 aaPredicted RBP21.39■■□□□ 1.01
RAB40C-204ENST00000538492 NME2P22392 152 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 HIKESHIQ53FT3 197 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 WNT2BQ93097 391 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 POM121L2Q96KW2 1035 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 HRH4Q9H3N8 390 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 TMEM231Q9H6L2 316 aa21.39■■□□□ 1.01
RAB40C-204ENST00000538492 PHF1O43189 567 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-204ENST00000538492 FBXO24O75426 580 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 TMEM33P57088 247 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 MST1LQ2TV78 715 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 LIAT1Q6ZQX7 453 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 KLF13Q9Y2Y9 288 aaPredicted RBP21.38■■□□□ 1.01
RAB40C-204ENST00000538492 TAAR5O14804 337 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 PPYP01298 95 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 OR4A4PQ8NGN8 299 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 SUCNR1Q9BXA5 334 aa21.38■■□□□ 1.01
RAB40C-204ENST00000538492 COX5BP10606 129 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 ADCYAP1P18509 176 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 RNPS1Q15287 305 aaKnown RBP21.37■■□□□ 1.01
RAB40C-204ENST00000538492 MDS2Q8NDY4 140 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 MSI2Q96DH6 328 aaKnown RBP21.37■■□□□ 1.01
RAB40C-204ENST00000538492 SYT3Q9BQG1 590 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 AMDHD2Q9Y303 409 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 PCNX2A6NKB5 2137 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 C3orf80F5H4A9 247 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 KLRC4-KLRK1H3BQV0 150 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 LILRA1O75019 489 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 ARR3P36575 388 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 PLP2Q04941 152 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 MEX3BQ6ZN04 569 aaKnown RBP21.37■■□□□ 1.01
RAB40C-204ENST00000538492 VASH2Q86V25 355 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 Q8NFD4 153 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 OR52M1Q8NGK5 317 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 LOXL4Q96JB6 756 aa21.37■■□□□ 1.01
RAB40C-204ENST00000538492 NKX6-2Q9C056 277 aaPredicted RBP21.37■■□□□ 1.01
RAB40C-204ENST00000538492 FAM74A7A6NL05 159 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 GPR31O00270 319 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 SYNGR1O43759 233 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 ATG12O94817 140 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 FGF12P61328 243 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 SLC10A1Q14973 349 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 FAM74A3Q4VXF1 159 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 NEK7Q8TDX7 302 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 C18orf12Q96KH6 178 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 TP53RKQ96S44 253 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 TSNAXQ99598 290 aaKnown RBP21.36■■□□□ 1.01
RAB40C-204ENST00000538492 TNRC6AQ8NDV7 1962 aaKnown RBP21.36■■□□□ 1.01
RAB40C-204ENST00000538492 DNASE2O00115 360 aaPredicted RBP21.36■■□□□ 1.01
RAB40C-204ENST00000538492 CST4P01036 141 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 ERGIC1Q969X5 290 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 FER1L6-AS2Q96M78 137 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 RSRP1Q9BUV0 290 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 MMP26Q9NRE1 261 aa21.36■■□□□ 1.01
RAB40C-204ENST00000538492 CD300LBA8K4G0 201 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 UCP3P55916 312 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 EIF5AP63241 154 aaKnown RBP21.35■■□□□ 1.01
RAB40C-204ENST00000538492 TSC22D1Q15714 1073 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 ZNF488Q96MN9 340 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 RNF122Q9H9V4 155 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 TRAPPC2LH3BP13 241 aa21.35■■□□□ 1.01
RAB40C-204ENST00000538492 SS18L1O75177 396 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-204ENST00000538492 MED6O75586 246 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms