RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 RTN4RL2Q86UN3 420 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 FAM58AQ8N1B3 248 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 OR52N4Q8NGI2 321 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 OR2G2Q8NGZ5 317 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 NDNFQ8TB73 568 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 ADAT3Q96EY9 351 aaPredicted RBP6.96□□□□□ -1.3
DDB1-212ENST00000538470 MRPL48Q96GC5 212 aaKnown RBP6.96□□□□□ -1.3
DDB1-212ENST00000538470 OPALINQ96PE5 141 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 MYCBPQ99417 103 aaPredicted RBP6.96□□□□□ -1.3
DDB1-212ENST00000538470 COMMD4Q9H0A8 199 aa6.96□□□□□ -1.3
DDB1-212ENST00000538470 EXOSC4Q9NPD3 245 aaKnown RBP6.96□□□□□ -1.3
DDB1-212ENST00000538470 RBFOX1Q9NWB1 397 aaKnown RBP6.96□□□□□ -1.3
DDB1-212ENST00000538470 TRGV10A0A0A0MS01 117 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 IGKV1-9A0A0C4DH69 117 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 SNTNA6NMZ2 147 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 FAM90A22PA8MWA6 464 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 H3BSH0 61 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 SLC16A6O15403 523 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 PSPNO60542 156 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 CSN2P05814 226 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 OCM2P0CE71 109 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 OCMP0CE72 109 aaPredicted RBP6.95□□□□□ -1.3
DDB1-212ENST00000538470 BCL3P20749 454 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 HTR1DP28221 377 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 CD34P28906 385 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 BRS3P32247 399 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 NPBWR2P48146 333 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 CCR9P51686 369 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 MTCP1P56278 107 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 SLC34A1Q06495 639 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 HABP2Q14520 560 aaPredicted RBP6.95□□□□□ -1.3
DDB1-212ENST00000538470 NSUN5P1Q3KNT7 163 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 TP53I3Q53FA7 332 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 FBLN7Q53RD9 439 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 SLC25A30Q5SVS4 291 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 MEDAGQ5VYS4 303 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 TRAPPC6BQ86SZ2 158 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 SAXO1Q8IYX7 474 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 CHST4Q8NCG5 386 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 OR4P4Q8NGL7 312 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 ZNF596Q8TC21 504 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 CAPSLQ8WWF8 208 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 RNF166Q96A37 237 aaPredicted RBP6.95□□□□□ -1.3
DDB1-212ENST00000538470 CREB3L1Q96BA8 519 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 HRASLS5Q96KN8 279 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 CHST6Q9GZX3 395 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 LIN7BQ9HAP6 207 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 HMG20AQ9NP66 347 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 TAS2R3Q9NYW6 316 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 IL36RNQ9UBH0 155 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 HHLA2Q9UM44 414 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 HILPDAQ9Y5L2 63 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 GMPPBQ9Y5P6 360 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 DNAH3Q8TD57 4116 aa6.95□□□□□ -1.3
DDB1-212ENST00000538470 DAPL1A0PJW8 107 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 MEX3AA1L020 520 aaKnown RBP6.94□□□□□ -1.3
DDB1-212ENST00000538470 ADARB2-AS1A8MUL3 147 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 OOSP1A8MZH6 123 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 H0YHG0 523 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 J3QRE1 110 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 SIRPB1O00241 398 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 SH2D1BO14796 132 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 PIN1P1O15428 100 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 KDM4BO94953 1096 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 OR2H2O95918 312 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 HTR1AP08908 422 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 CD28P10747 220 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 LMO1P25800 156 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 CEACAM3P40198 252 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 PTGFRP43088 359 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 RAB13P51153 203 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 SNRPGP62308 76 aaKnown RBP6.94□□□□□ -1.3
DDB1-212ENST00000538470 BDH1Q02338 343 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 MRPL28Q13084 256 aaKnown RBP6.94□□□□□ -1.3
DDB1-212ENST00000538470 PDZK1IP1Q13113 114 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 HEPN1Q6WQI6 88 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 TPRX1Q8N7U7 411 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 CYGBQ8WWM9 190 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 CORO2AQ92828 525 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 FGGYQ96C11 551 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 R3HDM4Q96D70 268 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 RNFT2Q96EX2 444 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 CPNE2Q96FN4 548 aaPredicted RBP6.94□□□□□ -1.3
DDB1-212ENST00000538470 MMP28Q9H239 520 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 NECAP2Q9NVZ3 263 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 SMPD3Q9NY59 655 aaPredicted RBP6.94□□□□□ -1.3
DDB1-212ENST00000538470 FRRS1LQ9P0K9 344 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 DPM3Q9P2X0 92 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 AASSQ9UDR5 926 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
DDB1-212ENST00000538470 A0A087X0M5 115 aa6.93□□□□□ -1.3
DDB1-212ENST00000538470 A0A1B0GX30 115 aa6.93□□□□□ -1.3
DDB1-212ENST00000538470 ZNF729A6NN14 1252 aaPredicted RBP6.93□□□□□ -1.3
DDB1-212ENST00000538470 LEUTXA8MZ59 168 aa6.93□□□□□ -1.3
DDB1-212ENST00000538470 M0QZK8 103 aa6.93□□□□□ -1.3
DDB1-212ENST00000538470 SULT1B1O43704 296 aa6.93□□□□□ -1.3
DDB1-212ENST00000538470 OR2F2O95006 317 aa6.93□□□□□ -1.3
DDB1-212ENST00000538470 INMTO95050 263 aa6.93□□□□□ -1.3
DDB1-212ENST00000538470 ALX3O95076 343 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms