RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 DEFA1P59665 94 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DEFA3P59666 94 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SPRNQ5BIV9 151 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CRIP3Q6Q6R5 217 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 C6orf201Q7Z4U5 140 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM90A1Q86YD7 464 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 Q8TCH9 128 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 C14orf79Q96F83 325 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 C1orf147Q96MC9 270 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CMSS1Q9BQ75 279 aaKnown RBP8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 THAP7Q9BT49 309 aaPredicted RBP8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAAP24Q9BTP7 215 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PECRQ9BY49 303 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 WDR13Q9H1Z4 485 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 AUNIPQ9H7T9 357 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 AKIP1Q9NQ31 210 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ETAA1Q9NY74 926 aa8.98□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FUOMA2VDF0 154 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MEIS3P1A6NDR6 274 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TMEM235A6NFC5 223 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CENPXA8MT69 81 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SRRM5B3KS81 715 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LYNX1G3V0Z9 82 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TMEM178BH3BS89 294 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 H7C1Q1 480 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 H7C417 338 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SSX4O60224 188 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PTBP3O95758 552 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GYPAP02724 150 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 LYNX1P0DP58 116 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 HIST1H1DP16402 221 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 EGR1P18146 543 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DNASE1P24855 282 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CBX5P45973 191 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ATP5J2P56134 94 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 AP3S2P59780 193 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ERVK11-1P61568 191 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DCTN2Q13561 401 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PNLIPRP3Q17RR3 467 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ZNF181Q2M3W8 571 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MOGAT2Q3SYC2 334 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM201AQ5SY85 155 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 HIST2H2BCQ6DN03 193 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 C11orf71Q6IPW1 123 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 TRAPPC6BQ86SZ2 158 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 FAM89BQ8N5H3 189 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 GCSAMQ8N6F7 178 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 SUMF2Q8NBJ7 301 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 MED30Q96HR3 178 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 NUDT16L1Q9BRJ7 211 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 DPCDQ9BVM2 203 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ZNF665Q9H7R5 613 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PLEKHF2Q9H8W4 249 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 BARX1Q9HBU1 254 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 ZNF701Q9NV72 531 aaPredicted RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 IL36RNQ9UBH0 155 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 PKDREJQ9NTG1 2253 aa8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 CHD3Q12873 2000 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-211ENST00000538363 A0A1W2PPR1 153 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 FAM221AA4D161 298 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SERPINE3A8MV23 424 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GABARAPH6UMI1 98 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RAB27BO00194 218 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SULT1C2O00338 296 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NDUFB3O43676 98 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NDUFA2O43678 99 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR2H2O95918 312 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 FCER2P06734 321 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 LPLP06858 475 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PSG2P11465 335 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GPR6P46095 362 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CEBPDP49716 269 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PDLIM4P50479 330 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ACTBP60709 375 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ACTG1P63261 375 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 COL10A1Q03692 680 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF146Q15072 292 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GRK1Q15835 563 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NHLRC3Q5JS37 347 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HACD4Q5VWC8 232 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GDPD3Q7L5L3 318 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SLC36A1Q7Z2H8 476 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MUC20Q8N307 709 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 BPIFB2Q8N4F0 458 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TOMM5Q8N4H5 51 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM185AQ8NFB2 350 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 Q8NFD4 153 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR5D13Q8NGL4 314 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SEH1LQ96EE3 360 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 COX4I2Q96KJ9 171 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ABHD1Q96SE0 405 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CCL13Q99616 98 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CCDC32Q9BV29 185 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ST6GALNAC5Q9BVH7 336 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SRRQ9GZT4 340 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CHODLQ9H9P2 273 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SCPEP1Q9HB40 452 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KCNIP1Q9NZI2 227 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HSF4Q9ULV5 492 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms