RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TERB2Q8NHR7 220 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 BLNKQ8WV28 456 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 PERPQ96FX8 193 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 BIN3Q9NQY0 253 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 SLC7A10Q9NS82 523 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 NPAP1Q9NZP6 1156 aa4.7□□□□□ -1.66
LRP6-203ENST00000538239 TMEM210A6NLX4 147 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 CST7O76096 145 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 PSMB6P28072 239 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 GFRA1P56159 465 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 MCCD1P59942 119 aaPredicted RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 RPS4XP62701 263 aaKnown RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 PPP1R32Q7Z5V6 425 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 DYNLRB2Q8TF09 96 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 OR1A1Q9P1Q5 309 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 IGHV3OR16-10A0A075B7F0 116 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SLC25A4P12235 298 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 PSG4Q00888 419 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 LINC00303Q3SY05 128 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 GVQW1Q8N7I0 195 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ZPLD1Q8TCW7 415 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 TMUB1Q9BVT8 246 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 FKBP11Q9NYL4 201 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ZNF646O15015 1829 aaPredicted RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 CYB5R3P00387 301 aaPredicted RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 FPR2P25090 351 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 TOR2AQ5JU69 321 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SLC25A30Q5SVS4 291 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 CD300LDQ6UXZ3 194 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SLC51BQ86UW2 128 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SLC25A32Q9H2D1 315 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SLC25A22Q9H936 323 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 RNF115Q9Y4L5 304 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 LRRC3CA6NJW4 275 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 TRDCB7Z8K6 153 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 CHEK1O14757 476 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SEMA7AO75326 666 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 CTAG2O75638 210 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 IGHA2P01877 340 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SMIM17P0DL12 118 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 BTG1P62324 171 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 PRSS53Q2L4Q9 553 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SOHLH1Q5JUK2 328 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ZNF787Q6DD87 383 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ETFRF1Q6IPR1 90 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 WFDC3Q8IUB2 231 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 C10orf111Q8N326 155 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 OR5M8Q8NGP6 311 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 DYNC2LI1Q8TCX1 351 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ITLN1Q8WWA0 313 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ADIPOR1Q96A54 375 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 GRAMD2BQ96HH9 432 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 NIPSNAP3BQ9BS92 247 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 A0A1W2PN81 502 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ZNF705GA8MUZ8 300 aaPredicted RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 COX5AP20674 150 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 PCMT1P22061 227 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 CHRNA7P36544 502 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 AKR1C3P42330 323 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SKA3Q8IX90 412 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ZNF439Q8NDP4 499 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 OR1B1Q8NGR6 318 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 RALGAPA2Q2PPJ7 1873 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 PYCARD-AS1I3L0S3 204 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 GIPP09681 153 aaPredicted RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 S100A4P26447 101 aaKnown RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 LSM11P83369 360 aaKnown RBP eCLIP4.69□□□□□ -1.66
LRP6-203ENST00000538239 OR2F1Q13607 317 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 P2RY6Q15077 328 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 ZBTB37Q5TC79 503 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 WDR13Q9H1Z4 485 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 PATZ1Q9HBE1 687 aaKnown RBP4.69□□□□□ -1.66
LRP6-203ENST00000538239 THYN1Q9P016 225 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 CACFD1Q9UGQ2 172 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 WIPI2Q9Y4P8 454 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 TET1Q8NFU7 2136 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 SBF1O95248 1867 aa4.69□□□□□ -1.66
LRP6-203ENST00000538239 KRBOX1C9JBD0 128 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 J3KRW8 73 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 RRASP10301 218 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 HTN1P15515 57 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 MMP15P51511 669 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 HMGA2P52926 109 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR2B8PP59922 312 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ASAH1Q13510 395 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 ZNF658BQ4V348 819 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 FNDC7Q5VTL7 733 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TGIF2LYQ8IUE0 185 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 TGIF2LXQ8IUE1 241 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 MUC20Q8N307 709 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR4F17Q8NGA8 305 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR1K1Q8NGR3 316 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 OR5B3Q8NH48 314 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 RPUSD4Q96CM3 377 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 GNPNAT1Q96EK6 184 aaPredicted RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 DIRC2Q96SL1 478 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 GPR27Q9NS67 375 aa4.68□□□□□ -1.66
LRP6-203ENST00000538239 LSM2Q9Y333 95 aaKnown RBP4.68□□□□□ -1.66
LRP6-203ENST00000538239 STARD10Q9Y365 291 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms