RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 J3QR89 54 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 C1QL1O75973 258 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZGLP1P0C6A0 271 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 BPIFB3P59826 476 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZXDCQ2QGD7 858 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 POC1AQ8NBT0 407 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 AGBL5Q8NDL9 886 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 SLC25A28Q96A46 364 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 IP6K3Q96PC2 410 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 PARD6GQ9BYG4 376 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF552Q9H707 407 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 NAT8BQ9UHF3 227 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 NUMA1Q14980 2115 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 DUXBA0A1W2PPF3 345 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 AQP7P3A6NL99 342 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 RAB29O14966 203 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TDGF1P3P51864 188 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 HSD17B7P56937 341 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 PCK2Q16822 640 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 MPV17LQ2QL34 196 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF343Q6P1L6 599 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF100Q8IYN0 542 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 FGF13Q92913 245 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 FAM122AQ96E09 287 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 WFDC6Q9BQY6 131 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 CNTD2Q9H8S5 307 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 FRRS1LQ9P0K9 344 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TUBD1Q9UJT1 453 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 GPR132Q9UNW8 380 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 A0A1W2PR80 420 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 H0YL77 283 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF205O95201 554 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TRGC1P0CF51 173 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 THBS3P49746 956 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 RPL24P83731 157 aaKnown RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 PAX5Q02548 391 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF154Q13106 437 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 TSPO2Q5TGU0 170 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 CYB561D1Q8N8Q1 229 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR2T10Q8NGZ9 312 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF385AQ96PM9 386 aaKnown RBP4.78□□□□□ -1.64
PTPRD-213ENST00000537002 OR51B4Q9Y5P0 310 aa4.78□□□□□ -1.64
PTPRD-213ENST00000537002 SERPINE3A8MV23 424 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF17P17021 662 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CDKN2AP42771 156 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR3A4PP47883 348 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF468Q5VIY5 522 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 RSPO2Q6UXX9 243 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF793Q6ZN11 406 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 C16orf82Q7Z2V1 217 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 C20orf196Q8IYI0 205 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 VN1R2Q8NFZ6 395 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 SLC25A43Q8WUT9 341 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 TP53RKQ96S44 253 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 FBXO34Q9NWN3 711 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ERGP11308 486 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 LSM6P62312 80 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 PDCD1Q15116 288 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 C2orf68Q2NKX9 166 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 DMRTA1Q5VZB9 504 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 STUMQ69YW2 141 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 MYPOPQ86VE0 399 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CATSPERDQ86XM0 798 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR2C3Q8N628 320 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 LIPHQ8WWY8 451 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 KLHDC7BQ96G42 594 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 S1PR5Q9H228 398 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 PTRH2Q9Y3E5 179 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 GOLGA4Q13439 2230 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CDC14BO60729 498 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 HSBP1O75506 76 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 MT-ATP6P00846 226 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 SNRPCP09234 159 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR10J4P0C629 311 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ZNF735P0CB33 412 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CSRP2Q16527 193 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 OR5B3Q8NH48 314 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ZPLD1Q8TCW7 415 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 SMIM12Q96EX1 92 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CDX2Q99626 313 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 NRTNQ99748 197 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 MBNL1Q9NR56 388 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 TRAV9-1A0A075B6T8 112 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 HS3ST1O14792 307 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CDS2O95674 445 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CDKN1BP46527 198 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 RPS4XP62701 263 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 RUNX2Q13950 521 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ELOBQ15370 118 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 UBALD2Q8IYN6 164 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CISD2Q8N5K1 135 aaKnown RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CPT1CQ8TCG5 803 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 ORAOV1Q8WV07 137 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 KCNE4Q8WWG9 221 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 CIB3Q96Q77 187 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 PRSS50Q9UI38 385 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 MBD1Q9UIS9 605 aaPredicted RBP4.77□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DL5BA0A0G2JN68 375 aa4.77□□□□□ -1.65
PTPRD-213ENST00000537002 KIR2DL5BA0A0G2JPC4 375 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms