RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SRSF8Q9BRL6 282 aaKnown RBP3.25□□□□□ -1.89
MCF2-210ENST00000536274 LMF2Q9BU23 707 aaKnown RBP3.25□□□□□ -1.89
MCF2-210ENST00000536274 RAB11FIP5Q9BXF6 653 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 ZNF665Q9H7R5 613 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 WDR76Q9H967 626 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 FAM60AQ9NP50 221 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 MANBALQ9NQG1 85 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 EHFQ9NZC4 300 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 MRM2Q9UI43 246 aaKnown RBP3.25□□□□□ -1.89
MCF2-210ENST00000536274 VWA8A3KMH1 1905 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 FAM24AA6NFZ4 105 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 PPP5D1E7EU14 171 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 H0YIV9 168 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 K7N7A8 449 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 ST8SIA3O43173 380 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 YPEL1O60688 119 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 JTBO76095 146 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 TOMM40O96008 361 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 FAHP16930 419 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 ALOX5APP20292 161 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 GALR1P47211 349 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 CX3CR1P49238 355 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 RAB9AP51151 201 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 LINC00310P59036 64 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 SELENOVP59797 346 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 TBPL1P62380 186 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 FAM3AP98173 230 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 IL24Q13007 206 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 DUSP8Q13202 625 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 ODF1Q14990 250 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 C1QL3Q5VWW1 255 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 FAM90A2PQ658T7 463 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 IGF2-ASQ6U949 168 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 SLC16A11Q8NCK7 471 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 OR2AP1Q8NGE2 309 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 OR52E1Q8NGJ3 308 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 DNAJB3Q8WWF6 145 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 AQP3Q92482 292 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 TMEM186Q96B77 213 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 SLC25A44Q96H78 314 aaPredicted RBP3.25□□□□□ -1.89
MCF2-210ENST00000536274 SFRP2Q96HF1 295 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 C2orf50Q96LR7 162 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 YPEL2Q96QA6 119 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 GPHA2Q96T91 129 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 MAGT1Q9H0U3 335 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 VSIRQ9H7M9 311 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 TMEM106BQ9NUM4 274 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 FBXL7Q9UJT9 491 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 TP53TG3Q9ULZ0 132 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 ST3GAL6Q9Y274 331 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 CNTRLQ7Z7A1 2325 aa3.25□□□□□ -1.89
MCF2-210ENST00000536274 COL5A1P20908 1838 aaPredicted RBP3.25□□□□□ -1.89
MCF2-210ENST00000536274 NCOR1O75376 2440 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TDRD6O60522 2096 aaKnown RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 A0A087WWC5 75 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 GAGE12BA1L429 117 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PGPEP1LA6NFU8 196 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TRDCB7Z8K6 153 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 UPK3AO75631 287 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CST7O76096 145 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 B3GAT3O94766 335 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 HLA-HP01893 362 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OPN1LWP04000 364 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PPIAL4GP0DN37 164 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 NPPBP16860 134 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 CXCR1P25024 350 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ATP6V0CP27449 155 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ZNF93P35789 620 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 CNN1P51911 297 aaKnown RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 SCGB2A2Q13296 93 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TMEM183BQ1AE95 376 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SAMD13Q5VXD3 122 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 DPY19L4Q7Z388 723 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR4N5Q8IXE1 308 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 PRR22Q8IZ63 422 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR52R1Q8NGF1 315 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR52M1Q8NGK5 317 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ZNF480Q8WV37 535 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TTC28Q96AY4 2481 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 OR7D2Q96RA2 312 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 C20orf144Q9BQM9 153 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ST6GALNAC5Q9BVH7 336 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 MS4A8Q9BY19 250 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 LPAR5Q9H1C0 372 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SRD5A3Q9H8P0 318 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ADAP2Q9NPF8 381 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 MKKSQ9NPJ1 570 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.24□□□□□ -1.89
MCF2-210ENST00000536274 RARRES3Q9UL19 164 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 VDAC3Q9Y277 283 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 ETV7Q9Y603 341 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 FRYQ5TBA9 3013 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 COL4A3Q01955 1670 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 KIF26BQ2KJY2 2108 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 A0A1W2PQU0 124 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 A0A1W2PRS3 328 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 LRRC3CA6NJW4 275 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 SERPINE3A8MV23 424 aa3.24□□□□□ -1.89
MCF2-210ENST00000536274 TLX3O43711 291 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms