RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF585AQ6P3V2 769 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 Q6ZPA2 131 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 FDCSPQ8NFU4 85 aa11.5□□□□□ -0.57
VPS33B-202ENST00000535906 DNASE2O00115 360 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-202ENST00000535906 PDCD6O75340 191 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 OR7C1O76099 320 aaPredicted RBP11.49□□□□□ -0.57
VPS33B-202ENST00000535906 HAAOP46952 286 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 PLP2Q04941 152 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 SGPP2Q8IWX5 399 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 OR1K1Q8NGR3 316 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 TMED6Q8WW62 240 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 HS3ST6Q96QI5 342 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 SLC5A7Q9GZV3 580 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 GSKIPQ9P0R6 139 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 TNRC6AQ8NDV7 1962 aaKnown RBP11.49□□□□□ -0.57
VPS33B-202ENST00000535906 CRYM-AS1A6NIL9 109 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 NUDT19A8MXV4 375 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 WISP2O76076 250 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 BCL3P20749 454 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 WNT5AP41221 380 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 RBM39Q14498 530 aaKnown RBP11.49□□□□□ -0.57
VPS33B-202ENST00000535906 CEACAM21Q3KPI0 293 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 DHRS11Q6UWP2 260 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 SLAMF9Q96A28 289 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 PCDHB16Q9NRJ7 776 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 NECAP2Q9NVZ3 263 aa11.49□□□□□ -0.57
VPS33B-202ENST00000535906 SHANK1Q9Y566 2161 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 TMEM218A2RU14 115 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 CST4P01036 141 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 FUT3P21217 361 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 S100A10P60903 97 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 CLN3Q13286 438 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 FAM219AQ8IW50 185 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 ZDHHC23Q8IYP9 409 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 Q8NFD4 153 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 BCL2L2Q92843 193 aaPredicted RBP11.48□□□□□ -0.57
VPS33B-202ENST00000535906 ARL11Q969Q4 196 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 NKX6-2Q9C056 277 aaPredicted RBP11.48□□□□□ -0.57
VPS33B-202ENST00000535906 OR51B6Q9H340 312 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 ZC4H2Q9NQZ6 224 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 TAAR5O14804 337 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 LILRA1O75019 489 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 ATG12O94817 140 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 SLC22A25Q6T423 547 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 ZNF442Q9H7R0 627 aa11.48□□□□□ -0.57
VPS33B-202ENST00000535906 CD300LBA8K4G0 201 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 ZNF732B4DXR9 585 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 SPINK2P20155 84 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 APLNRP35414 380 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 ARHGDIBP52566 201 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 IAH1Q2TAA2 248 aaPredicted RBP11.47□□□□□ -0.57
VPS33B-202ENST00000535906 MDP1Q86V88 176 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 TOMM40LQ969M1 308 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 CNTNAP3BQ96NU0 1288 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 CNTNAP3Q9BZ76 1288 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 MTCH1Q9NZJ7 389 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 IL36RNQ9UBH0 155 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 LAMA5O15230 3695 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 ARID1AO14497 2285 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 TOR1AO14656 332 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 CTRB1P17538 263 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 EIF5AP63241 154 aaKnown RBP11.47□□□□□ -0.57
VPS33B-202ENST00000535906 CTRB2Q6GPI1 263 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 OR2S2Q9NQN1 319 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 MMP26Q9NRE1 261 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 LPAR3Q9UBY5 353 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 TUBD1Q9UJT1 453 aa11.47□□□□□ -0.57
VPS33B-202ENST00000535906 ABCD4O14678 606 aa11.46□□□□□ -0.57
VPS33B-202ENST00000535906 HKR1P10072 659 aa11.46□□□□□ -0.57
VPS33B-202ENST00000535906 GCNT2Q8N0V5 402 aa11.46□□□□□ -0.57
VPS33B-202ENST00000535906 ZNF286AQ9HBT8 521 aa11.46□□□□□ -0.57
VPS33B-202ENST00000535906 ZNF175Q9Y473 711 aa11.46□□□□□ -0.57
VPS33B-202ENST00000535906 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.58
VPS33B-202ENST00000535906 IFNA21P01568 189 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 FCGR2CP31995 323 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 AKR1C2P52895 323 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 PIGPP57054 158 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 FXYD4P59646 89 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 FGF12P61328 243 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 AKR1C1Q04828 323 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 TMEM211Q6ICI0 200 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 FAM122CQ6P4D5 195 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 IL34Q6ZMJ4 242 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 MYPOPQ86VE0 399 aaPredicted RBP11.46□□□□□ -0.58
VPS33B-202ENST00000535906 TMEM200AQ86VY9 491 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 SVBPQ8N300 66 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 OR5A2Q8NGI9 324 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 GMPPAQ96IJ6 420 aaPredicted RBP11.46□□□□□ -0.58
VPS33B-202ENST00000535906 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.58
VPS33B-202ENST00000535906 GP6Q9HCN6 339 aa11.46□□□□□ -0.58
VPS33B-202ENST00000535906 BOD1L1Q8NFC6 3051 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 A0A1W2PR80 420 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 FAM74A7A6NL05 159 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 SYNGR1O43759 233 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 DEDDO75618 318 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 ZNF728P0DKX0 622 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 ADCYAP1P18509 176 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 MST1LQ2TV78 715 aa11.45□□□□□ -0.58
VPS33B-202ENST00000535906 FAM74A3Q4VXF1 159 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms