RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 BOD1Q96IK1 185 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 METTL9Q9H1A3 318 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 GLRX2Q9NS18 164 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 GAR1Q9NY12 217 aaKnown RBP11.62□□□□□ -0.55
HDAC4-214ENST00000535493 MYOTQ9UBF9 498 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 C10orf142B7Z368 130 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 HSD17B6O14756 317 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 TMEM50AO95807 157 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 PMELP40967 661 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 FAM189A2Q15884 450 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 HIST3H3Q16695 136 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF774Q6NX45 483 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 PLXDC1Q8IUK5 500 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 PLPP5Q8NEB5 264 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 TSTD1Q8NFU3 115 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 ST3GAL6Q9Y274 331 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 V9GYS6 101 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 A0A1W2PR77 199 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 PROB1E7EW31 1015 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 OR7C1O76099 320 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-214ENST00000535493 SLC34A2O95436 690 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 LCATP04180 440 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 ALDH3B1P43353 468 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 CDX1P47902 265 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-214ENST00000535493 NKAIN1Q4KMZ8 207 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 OR2M3Q8NG83 312 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 S100PBPQ96BU1 408 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 HSF4Q9ULV5 492 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 LOC400499M0QZD8 3231 aa11.61□□□□□ -0.55
HDAC4-214ENST00000535493 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 RRP8O43159 456 aaKnown RBP11.6□□□□□ -0.55
HDAC4-214ENST00000535493 FABP4P15090 132 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 LMO1P25800 156 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 DYNLT3P51808 116 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 DEFA6Q01524 100 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF154Q13106 437 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 GAMTQ14353 236 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 C17orf82Q86X59 251 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-214ENST00000535493 LGI3Q8N145 548 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 CCDC54Q8NEL0 328 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 PP6455Q8WZ26 134 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 NABP1Q96AH0 204 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 OR6C1Q96RD1 312 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF442Q9H7R0 627 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 DECR2Q9NUI1 292 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 KIAA2026Q5HYC2 2103 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 A0A1B0GV90 55 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 AQP7P3A6NL99 342 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF729A6NN14 1252 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-214ENST00000535493 C2CD4DB7Z1M9 353 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 ADAM20O43506 726 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 DUX1O43812 170 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 IGLV3-1P01715 115 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 NPBWR2P48146 333 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 COMMD1Q8N668 190 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 MALSU1Q96EH3 234 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 GALNT14Q96FL9 552 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 MEGF10Q96KG7 1140 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 CDCA3Q99618 268 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-214ENST00000535493 SMOC1Q9H4F8 434 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 DMRT1Q9Y5R6 373 aa11.6□□□□□ -0.55
HDAC4-214ENST00000535493 SRP19P09132 144 aaKnown RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF133P52736 654 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 RAET1LQ5VY80 246 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF610Q8N9Z0 462 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 OR14L1PQ8NHC6 308 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 STRAPQ9Y3F4 350 aaKnown RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 C3orf85A0A1B0GTC6 90 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 TLX3O43711 291 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 HLA-HP01893 362 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 CD63P08962 238 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 NTF4P34130 210 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 HERV-K104P61576 105 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 HNRNPKP61978 463 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■■■□ 19.5
HDAC4-214ENST00000535493 KHDC3LQ587J8 217 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 SLC25A45Q8N413 288 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 OR4D5Q8NGN0 318 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 BORCS8Q96FH0 119 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 RASL10BQ96S79 203 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 TGIF2Q9GZN2 237 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 PRDM13Q9H4Q3 707 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 UCK1Q9HA47 277 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 SLC7A10Q9NS82 523 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 UBE2J1Q9Y385 318 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 WSB1Q9Y6I7 421 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 FREM1Q5H8C1 2179 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 A0A0U1RQV5 110 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 NPIPA2E9PIF3 369 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 NPIPA3F8WFD2 350 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 B4GALT1P15291 398 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 LTBRP36941 435 aa11.59□□□□□ -0.55
HDAC4-214ENST00000535493 SUCLG1P53597 346 aaKnown RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 FGF8P55075 233 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 SUMO3P55854 103 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-214ENST00000535493 IL13RA2Q14627 380 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms