RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	OR14A2	Q96R54	314 aa		11.9	□□□□□ -0.5
CTSB-231	ENST00000534382	OR5M11	Q96RB7	305 aa		11.9	□□□□□ -0.5
CTSB-231	ENST00000534382	EXOSC4	Q9NPD3	245 aa	Known RBP	11.9	□□□□□ -0.5
CTSB-231	ENST00000534382	NOX4	Q9NPH5	578 aa		11.9	□□□□□ -0.5
CTSB-231	ENST00000534382	CKLF	Q9UBR5	152 aa		11.9	□□□□□ -0.5
CTSB-231	ENST00000534382	LSM2	Q9Y333	95 aa	Known RBP	11.9	□□□□□ -0.5
CTSB-231	ENST00000534382	hCG_1809904	A0A1W2PP81	198 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A1W2PPE2	198 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A1W2PR64	198 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A1W2PRV1	198 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	RGS10	O43665	173 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	FST	P19883	344 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	EEF1B2	P24534	225 aa	Known RBP	11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	LMO1	P25800	156 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	ZNF93	P35789	620 aa	Predicted RBP	11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	TGFBR2	P37173	567 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	PTGFR	P43088	359 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	MTNR1B	P49286	362 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	UBE2E1	P51965	193 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	KLRD1	Q13241	179 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	ZNF273	Q14593	569 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	MED22	Q15528	200 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	GRK1	Q15835	563 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	RBM48	Q5RL73	367 aa	Known RBP	11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	ELP2	Q6IA86	826 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	ASCL4	Q6XD76	172 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	C11orf42	Q8N5U0	333 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	OR4S1	Q8NGB4	309 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	PPP1R35	Q8TAP8	253 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	THRSP	Q92748	146 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	DERL3	Q96Q80	235 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	CHST6	Q9GZX3	395 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	ZMAT3	Q9HA38	289 aa	Known RBP	11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	FOXJ3	Q9UPW0	622 aa		11.89	□□□□□ -0.51
CTSB-231	ENST00000534382	TRAV8-7	A0A075B6U6	113 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A0U1RQK1	487 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A1W2PPK0	400 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	CLDN34	H7C241	214 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	SIRPB1	O00241	398 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	MGST3	O14880	152 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	ZNF44	P15621	663 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	CCL3L1	P16619	93 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	OR3A1	P47881	315 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	OR3A4P	P47883	348 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	MEF2C	Q06413	473 aa	Predicted RBP	11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	SCN1B	Q07699	218 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	EDDM3A	Q14507	147 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	RSU1	Q15404	277 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	SLC9A3R2	Q15599	337 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382		Q6P435	159 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382		Q6YL49	198 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	PRSS48	Q7RTY5	328 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	MS4A15	Q8N5U1	240 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	CHST4	Q8NCG5	386 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382		Q8NFD4	153 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	SLC25A28	Q96A46	364 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	ZNF184	Q99676	751 aa	Predicted RBP	11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	NKX3-1	Q99801	234 aa	Predicted RBP	11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	CCDC90B	Q9GZT6	254 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	FAM192A	Q9GZU8	254 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	HEXA-AS1	Q9H8Q6	139 aa		11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	SF3B6	Q9Y3B4	125 aa	Known RBP	11.88	□□□□□ -0.51
CTSB-231	ENST00000534382	DNHD1	Q96M86	4753 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A0G2JK05	382 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A1W2PRD5	423 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A1W2PRF3	423 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382		A0A1W2PRM7	423 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	hADV38S2	A0JD32	116 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	C17orf98	A8MV24	154 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	DEGS1	O15121	323 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	NPFF	O15130	113 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	PIN1P1	O15428	100 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	HOXA3	O43365	443 aa	Predicted RBP	11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	RNASE1	P07998	156 aa	Known RBP	11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	MAPK3	P27361	379 aa	Predicted RBP	11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	ERP29	P30040	261 aa	Known RBP	11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	DLX6	P56179	175 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	ACTG1	P63261	375 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	GPR50	Q13585	617 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	HCP5	Q6MZN7	132 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	UNQ9370/PRO34162	Q6UXP9	181 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	OR51T1	Q8NGJ9	327 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	OR10K1	Q8NGX5	313 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	NR1H4	Q96RI1	486 aa	Predicted RBP	11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	S100A13	Q99584	98 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	METTL9	Q9H1A3	318 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	IL36G	Q9NZH8	169 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	BLOC1S6	Q9UL45	172 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	ING4	Q9UNL4	249 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	FAM96B	Q9Y3D0	163 aa		11.87	□□□□□ -0.51
CTSB-231	ENST00000534382	STAB1	Q9NY15	2570 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	MEX3A	A1L020	520 aa	Known RBP	11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	TMEM89	A2RUT3	159 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	MAGEA13P	A6NCF6	341 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	CDRT1	O95170	752 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	HTR3B	O95264	441 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	RBP4	P02753	201 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	MELTF	P08582	738 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	ZNF728	P0DKX0	622 aa		11.86	□□□□□ -0.51
CTSB-231	ENST00000534382	P2RX3	P56373	397 aa		11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms