RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SLC36A1Q7Z2H8 476 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 LINC00346Q8IVM7 164 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF695Q8IW36 515 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 BATF2Q8N1L9 274 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OSR2Q8N2R0 312 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CBR4Q8N4T8 237 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 DPP10Q8N608 796 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CD177Q8N6Q3 437 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 LRRC75AQ8NAA5 344 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF555Q8NEP9 628 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC26A10Q8NG04 563 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR1M1Q8NGA1 313 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 GPR32P1Q8NGA4 272 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR51D1Q8NGF3 324 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR5L1Q8NGL2 311 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR6T1Q8NGN1 323 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR51A7Q8NH64 312 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 OR2AE1Q8NHA4 323 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RPS4Y2Q8TD47 263 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 GIPC3Q8TF64 312 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TMEM255BQ8WV15 326 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RPL3LQ92901 407 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ITFG2Q969R8 447 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM162AQ96A26 154 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 APOBEC3DQ96AK3 386 aaPredicted RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TESCQ96BS2 214 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 DGCR14Q96DF8 476 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SGTBQ96EQ0 304 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 NRBF2Q96F24 287 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 FAM210AQ96ND0 272 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TSSK2Q96PF2 358 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZBTB18Q99592 522 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ADAT1Q9BUB4 502 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 C9orf16Q9BUW7 83 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 IFT27Q9BW83 186 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TM2D2Q9BX73 214 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 FGF23Q9GZV9 251 aaPredicted RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TXNIPQ9H3M7 391 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RAD21L1Q9H4I0 556 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RIBC2Q9H4K1 309 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 IKZF5Q9H5V7 419 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ARMC7Q9H6L4 198 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 EVA1AQ9H8M9 152 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 HEXA-AS1Q9H8Q6 139 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SPAG4Q9NPE6 437 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TUBG2Q9NRH3 451 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 KRT84Q9NSB2 600 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 HAO2Q9NYQ3 351 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 CALML5Q9NZT1 146 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 MRPL15Q9P015 296 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZMAT5Q9UDW3 170 aaKnown RBP2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RIMS3Q9UJD0 308 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF229Q9UJW7 825 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 RPS6KA6Q9UK32 745 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC7A7Q9UM01 511 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 ORC6Q9Y5N6 252 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 LHFPL6Q9Y693 200 aa2.29□□□□□ -2.04
CHMP4A-208ENST00000534106 TRAV27A0A087WT01 109 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 IGLV1-36A0A0B4J1U3 117 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 TEX13CA0A0J9YWL9 993 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GGT3PA6NGU5 568 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ODF3BA8MYP8 253 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 CENPBD1B2RD01 187 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 C5orf58C9J3I9 102 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 J3QRK9 145 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 M0QX08 132 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 DCTN6O00399 190 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 EI24O14681 340 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SIGLEC5O15389 551 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 DENRO43583 198 aaKnown RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 CHP2O43745 196 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GMDSO60547 372 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC16A7O60669 478 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 E2F6O75461 281 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 MMP23AO75900 390 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GLCEO94923 617 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ALDOBP05062 364 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 CLEC3BP05452 202 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 FGF2P09038 288 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SPARCP09486 303 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ACSM4P0C7M7 580 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 PSG2P11465 335 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GP9P14770 177 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 MUC1P15941 1255 aaPredicted RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 ZNF823P16415 610 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 FASP25445 335 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GGT2P36268 569 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 GSSP48637 474 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 DAP3P51398 398 aaKnown RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 CAPZA1P52907 286 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SLC25A1P53007 311 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 DLX6P56179 175 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 OR12D2P58182 307 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 LSM3P62310 102 aaKnown RBP2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 HIST1H3AP68431 136 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 EFNB1P98172 346 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 MS4A2Q01362 244 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SCRN3Q0VDG4 424 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 SELPLGQ14242 412 aa2.28□□□□□ -2.04
CHMP4A-208ENST00000534106 HNF4GQ14541 408 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms