RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 RPRMLQ8N4K4 120 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 PAQR4Q8N4S7 273 aaPredicted RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 WDR31Q8NA23 367 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 C19orf18Q8NEA5 215 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 SLC30A7Q8NEW0 376 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 SLC24A4Q8NFF2 622 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 STEAP2Q8NFT2 490 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 OR52L2PQ8NGH6 319 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 DPF1Q92782 380 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 PIGTQ969N2 578 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 CPNE2Q96FN4 548 aaPredicted RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 TECTBQ96PL2 329 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 NKX3-1Q99801 234 aaPredicted RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 THAP7Q9BT49 309 aaPredicted RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 SLC22A4Q9H015 551 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 AUNIPQ9H7T9 357 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 NGBQ9NPG2 151 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 ZNF71Q9NQZ8 489 aaPredicted RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 PCDHB16Q9NRJ7 776 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 RBFOX1Q9NWB1 397 aaKnown RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 GHRLQ9UBU3 117 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 SLC25A10Q9UBX3 287 aaPredicted RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 RAB22AQ9UL26 194 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 MRPS28Q9Y2Q9 187 aaKnown RBP4.87□□□□□ -1.63
CHKA-208ENST00000533910 BSNQ9UPA5 3926 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 SHANK1Q9Y566 2161 aa4.87□□□□□ -1.63
CHKA-208ENST00000533910 MAP1BP46821 2468 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 ITPR1Q14643 2758 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 FUOMA2VDF0 154 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 GAGE10A6NGK3 116 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 NPIPB5A8MRT5 1133 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 F8WDY8 70 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 MPPED1O15442 326 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 GMDSO60547 372 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 SCGNO76038 276 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 KDM4BO94953 1096 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 OR2C1O95371 312 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 CST4P01036 141 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 NGFP01138 241 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 CD3GP09693 182 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 CCL2P13500 99 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 CBR1P16152 277 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 BTCP35070 178 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 APLNRP35414 380 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 PTGFRP43088 359 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 CDKN1BP46527 198 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 OR3A4PP47883 348 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 UBE2NP61088 152 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 TSPAN5P62079 268 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 SSBP1Q04837 148 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 PMPCAQ10713 525 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 KLF9Q13886 244 aaPredicted RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 KISS1Q15726 138 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 PRR30Q53SZ7 412 aaPredicted RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 CLVS2Q5SYC1 327 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 OLFML2AQ68BL7 652 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 IGFL4Q6B9Z1 124 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 AWAT2Q6E213 333 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 GLIPR1L1Q6UWM5 242 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 FBXW12Q6X9E4 464 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 ASCL4Q6XD76 172 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 MRPL21Q7Z2W9 205 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 MYPOPQ86VE0 399 aaPredicted RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 ANGPTL5Q86XS5 388 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 ZNF101Q8IZC7 436 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 PNLDC1Q8NA58 520 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 CSNK2A3Q8NEV1 391 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 OR52I2Q8NH67 350 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 DEDD2Q8WXF8 326 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 DVL3Q92997 716 aaPredicted RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 SNRNP40Q96DI7 357 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 SPACA5Q96QH8 159 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 C7orf50Q9BRJ6 194 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 OPN3Q9H1Y3 402 aaPredicted RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 NEK6Q9HC98 313 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 MOV10Q9HCE1 1003 aaKnown RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 DIABLOQ9NR28 239 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 GPR173Q9NS66 373 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 SERTAD4Q9NUC0 356 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 KCNN3Q9UGI6 736 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 AMDHD2Q9Y303 409 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 CACNG2Q9Y698 323 aa4.86□□□□□ -1.63
CHKA-208ENST00000533910 RP1L1Q8IWN7 2480 aaPredicted RBP4.86□□□□□ -1.63
CHKA-208ENST00000533910 SPTA1P02549 2419 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 ZZEF1O43149 2961 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 IGKV1-27A0A075B6S5 117 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 TRAV18A0A075B6X5 111 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 A0A0A6YYD4 124 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 ANKRD20A5PA0PJZ0 165 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 PQLC2LA1A4F0 135 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 METTL21EPA6NDL7 271 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 TMEM8BA6NDV4 472 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 WIPF3A6NGB9 483 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 FAM90A7PA6NKC0 464 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 SH2D7A6NKC9 451 aaPredicted RBP4.85□□□□□ -1.63
CHKA-208ENST00000533910 OR5H1A6NKK0 313 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 CD300LBA8K4G0 201 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 FOXI3A8MTJ6 420 aaPredicted RBP4.85□□□□□ -1.63
CHKA-208ENST00000533910 FAM90A22PA8MWA6 464 aa4.85□□□□□ -1.63
CHKA-208ENST00000533910 FAM90A12PA8MX19 464 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms