RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GLI4P10075 376 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 MALLQ13021 153 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 EXT1Q16394 746 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 SP5Q6BEB4 398 aaPredicted RBP14.37□□□□□ -0.11
CTSB-228ENST00000533455 ZNF774Q6NX45 483 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 SPSB3Q6PJ21 355 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 OR14L1PQ8NHC6 308 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 POM121Q96HA1 1249 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 TMEM222Q9H0R3 208 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 TMPRSS5Q9H3S3 457 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 UNKLQ9H9P5 680 aaKnown RBP14.37□□□□□ -0.11
CTSB-228ENST00000533455 ST3GAL6Q9Y274 331 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 A0A0J9YW62 118 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 IGHV5-10-1A0A0J9YXX1 117 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 hCG_38984A0A1B0GV85 526 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 A0A1W2PQM1 296 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 IGSF23A1L1A6 192 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 NKX2-6A6NCS4 301 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 FAM24AA6NFZ4 105 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 DNPH1O43598 174 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 OR2C1O95371 312 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 PPYP01298 95 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 LCATP04180 440 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 CCL3P10147 92 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 TCN2P20062 427 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 ATP6V0CP27449 155 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 FUT6P51993 359 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 RBM11P57052 281 aaKnown RBP14.37□□□□□ -0.11
CTSB-228ENST00000533455 BRICD5Q6PL45 260 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 OR2G3Q8NGZ4 309 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 MUCL1Q96DR8 90 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 TMEM56Q96MV1 263 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 SPIN2AQ99865 258 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 RARRES2Q99969 163 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 SPIN2BQ9BPZ2 258 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 TMEM38BQ9NVV0 291 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 DKKL1Q9UK85 242 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 TMEM56-RWDD3S4R434 201 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 SHANK1Q9Y566 2161 aa14.37□□□□□ -0.11
CTSB-228ENST00000533455 CABIN1Q9Y6J0 2220 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 MED19A0JLT2 244 aaPredicted RBP14.36□□□□□ -0.11
CTSB-228ENST00000533455 RBFOX3A6NFN3 312 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 NKX2-1P43699 371 aaPredicted RBP14.36□□□□□ -0.11
CTSB-228ENST00000533455 OR2B8PP59922 312 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 RND3P61587 244 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 RAC1P63000 192 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 GUSBP11Q6P575 273 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 MEX3BQ6ZN04 569 aaKnown RBP14.36□□□□□ -0.11
CTSB-228ENST00000533455 Q6ZS49 121 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 SRXN1Q9BYN0 137 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 PLEKHF2Q9H8W4 249 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 SH2D2AQ9NP31 389 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 KIAA1456Q9P272 454 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 MIOXQ9UGB7 285 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 TCFL5Q9UL49 500 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 CELA2AP08217 269 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 POLR2GP62487 172 aaKnown RBP eCLIP14.36□□□□□ -0.11
CTSB-228ENST00000533455 FAM209BQ5JX69 171 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 CCDC74BQ96LY2 380 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 TECTBQ96PL2 329 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 SLC25A31Q9H0C2 315 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 WDR54Q9H977 334 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 LYRM2Q9NU23 88 aaPredicted RBP14.36□□□□□ -0.11
CTSB-228ENST00000533455 SLC7A11Q9UPY5 501 aa14.36□□□□□ -0.11
CTSB-228ENST00000533455 PUS1Q9Y606 427 aaKnown RBP eCLIP14.36□□□□□ -0.11
CTSB-228ENST00000533455 TRIOO75962 3097 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 A0A087WWC5 75 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 ZNF724A8MTY0 619 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 TNFSF11O14788 317 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 TXNL1O43396 289 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 ZNF32P17041 273 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 FUT3P21217 361 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 ASCL1P50553 236 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 CCL20P78556 96 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 CCL7P80098 99 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 DPPA2Q7Z7J5 298 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 CPT1CQ8TCG5 803 aa14.35□□□□□ -0.11
CTSB-228ENST00000533455 IGHV1-45A0A0A0MS14 117 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 A0A1B0GV50 99 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 DUXBA0A1W2PPF3 345 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 CLEC18AA5D8T8 446 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 ZNF732B4DXR9 585 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 GPR37O15354 613 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 HSPA12AO43301 675 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 SRP19P09132 144 aaKnown RBP14.34□□□□□ -0.11
CTSB-228ENST00000533455 MMP9P14780 707 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 HTR5AP47898 357 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 DAZAP2Q15038 168 aaPredicted RBP14.34□□□□□ -0.11
CTSB-228ENST00000533455 TMEM252Q8N6L7 170 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 CLEC18CQ8NCF0 446 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 HIPK2Q9H2X6 1198 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 AKIRIN1Q9H9L7 192 aaPredicted RBP14.34□□□□□ -0.11
CTSB-228ENST00000533455 FAM86C1Q9NVL1 165 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 LY6G6EA0A0G2JKS1 128 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 GJE1A6NN92 205 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 HOXA5P20719 270 aa14.34□□□□□ -0.11
CTSB-228ENST00000533455 NOVA1P51513 510 aaKnown RBP14.34□□□□□ -0.11
CTSB-228ENST00000533455 PRSS12P56730 875 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms