RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 NKX6-3A6NJ46 265 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 F5H0A9 414 aaPredicted RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 CRTAPO75718 401 aaPredicted RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 SCGNO76038 276 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 GLAP06280 429 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 CHRM2P08172 466 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 SLC2A2P11168 524 aaPredicted RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 CLDN12P56749 244 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 RPS27AP62979 156 aaKnown RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 FAM201AQ5SY85 155 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 SFRP4Q6FHJ7 346 aaPredicted RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 MZT2AQ6P582 158 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 ZNF788Q6ZQV5 615 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 SLC36A1Q7Z2H8 476 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 ZNF561Q8N587 486 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 FAM89BQ8N5H3 189 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 BOLLQ8N9W6 283 aaKnown RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 TMEM104Q8NE00 496 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 MED30Q96HR3 178 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 NUDT16L1Q9BRJ7 211 aaKnown RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 TMEM246Q9BRR3 403 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 FAM234AQ9H0X4 552 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 ZNF665Q9H7R5 613 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 SPACA1Q9HBV2 294 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 ASH1LQ9NR48 2969 aaKnown RBP10.44□□□□□ -0.74
COPB1-208ENST00000532088 ADAM30Q9UKF2 790 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 ST3GAL6Q9Y274 331 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 ABCA12Q86UK0 2595 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 NAV2Q8IVL1 2488 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 ARID1AO14497 2285 aa10.44□□□□□ -0.74
COPB1-208ENST00000532088 A0A075B6Q4 140 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 IGKV1D-17A0A075B6S4 117 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 IGHV4-30-2A0A087WSY4 118 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 A0A0A6YYH2 397 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 A0A1W2PP11 408 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 A6NJ64 397 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 RFPL4AA6NLU0 287 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 CEACAM18A8MTB9 384 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 RFPL4AL1F8VTS6 287 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 SH2D1BO14796 132 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 SIGLEC5O15389 551 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 MPIG6BO95866 241 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 HAND1O96004 215 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 HEXAP06865 529 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 PRDX2P32119 198 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 NPY4RP50391 375 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 ART1P52961 327 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 OR10K1Q8NGX5 313 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 LGALS14Q8TCE9 139 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 RAB39BQ96DA2 213 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 GAL3ST1Q99999 423 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 NXF2Q9GZY0 626 aaKnown RBP10.43□□□□□ -0.74
COPB1-208ENST00000532088 LPAR5Q9H1C0 372 aa10.43□□□□□ -0.74
COPB1-208ENST00000532088 PATZ1Q9HBE1 687 aaKnown RBP10.43□□□□□ -0.74
COPB1-208ENST00000532088 RCC2Q9P258 522 aaKnown RBP10.43□□□□□ -0.74
COPB1-208ENST00000532088 ANKRD17O75179 2603 aaKnown RBP10.42□□□□□ -0.74
COPB1-208ENST00000532088 IGHV3OR15-7A0A075B7D8 119 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 A0A096LNT2 108 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 ISPDA4D126 451 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 METTL21EPA6NDL7 271 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 GYPAP02724 150 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 CSN2P05814 226 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 WNT2P09544 360 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 AMY2BP19961 511 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 USF1P22415 310 aaPredicted RBP10.42□□□□□ -0.74
COPB1-208ENST00000532088 ADMP35318 185 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 KCNJ3P48549 501 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 IL13RA1P78552 427 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 PAX5Q02548 391 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 LOXL1Q08397 574 aaPredicted RBP10.42□□□□□ -0.74
COPB1-208ENST00000532088 PIGYQ3MUY2 71 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 AVPI1Q5T686 147 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 RAB12Q6IQ22 244 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 Q6P435 159 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 NLRC3Q7RTR2 1065 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 CD177Q8N6Q3 437 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 DEFB108BQ8NET1 73 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 OR8B3Q8NGG8 313 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 OR56B1Q8NGI3 324 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 PPP1R35Q8TAP8 253 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 RAB40AQ8WXH6 277 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 FAM46BQ96A09 425 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 SEH1LQ96EE3 360 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 NEIL1Q96FI4 390 aaPredicted RBP10.42□□□□□ -0.74
COPB1-208ENST00000532088 C1orf159Q96HA4 380 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 SNX22Q96L94 193 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 GAFA1Q96PS6 74 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 OR8B2Q96RD0 313 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 SELENOIQ9C0D9 397 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 SLIRPQ9GZT3 109 aaKnown RBP10.42□□□□□ -0.74
COPB1-208ENST00000532088 ABCG5Q9H222 651 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 BANF2Q9H503 90 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 CENPEQ02224 2701 aa10.42□□□□□ -0.74
COPB1-208ENST00000532088 CSMD2Q7Z408 3487 aa10.41□□□□□ -0.74
COPB1-208ENST00000532088 A0A0B4J203 849 aa10.41□□□□□ -0.74
COPB1-208ENST00000532088 FOXI3A8MTJ6 420 aaPredicted RBP10.41□□□□□ -0.74
COPB1-208ENST00000532088 GEMIN2O14893 280 aaKnown RBP10.41□□□□□ -0.74
COPB1-208ENST00000532088 DEGS1O15121 323 aa10.41□□□□□ -0.74
COPB1-208ENST00000532088 ZNF737O75373 536 aa10.41□□□□□ -0.74
COPB1-208ENST00000532088 ZNF205O95201 554 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms