RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 AGBL5Q8NDL9 886 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 OR5B12Q96R08 314 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 MAGT1Q9H0U3 335 aa12.34□□□□□ -0.43
PCF11-204ENST00000530660 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
PCF11-204ENST00000530660 PRRT4C9JH25 899 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 HCRTR2O43614 444 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 BCL2P10415 239 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 TAS2R46P59540 309 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 GNMTQ14749 295 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 TMEM241Q24JQ0 296 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 ACOT6Q3I5F7 207 aaPredicted RBP12.33□□□□□ -0.44
PCF11-204ENST00000530660 PHLDA2Q53GA4 152 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 C9orf50Q5SZB4 431 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 ADAMTSL4Q6UY14 1074 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 LIME1Q9H400 295 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 OR6C3Q9NZP0 311 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 DAPP1Q9UN19 280 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 CEBPZOSA8MTT3 80 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 TSPAN2O60636 221 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 PPBPP02775 128 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 OGFOD3Q6PK18 319 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.44
PCF11-204ENST00000530660 OR10G4Q8NGN3 311 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 OR52N5Q8NH56 324 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 SMIM7Q9BQ49 75 aa12.33□□□□□ -0.44
PCF11-204ENST00000530660 THAP10Q9P2Z0 257 aaPredicted RBP12.33□□□□□ -0.44
PCF11-204ENST00000530660 NKX2-2O95096 273 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 MGAT2Q10469 447 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 ERASQ7Z444 233 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 ZNF709Q8N972 641 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 OR4C5Q8NGB2 326 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 OR5D18Q8NGL1 313 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 OR5L1Q8NGL2 311 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 C1orf147Q96MC9 270 aaPredicted RBP12.32□□□□□ -0.44
PCF11-204ENST00000530660 PRSS50Q9UI38 385 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 CNTRLQ7Z7A1 2325 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 GRIFINA4D1Z8 144 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 MAP1LC3B2A6NCE7 125 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 HRKO00198 91 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 CMPK1P30085 196 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 DYNLT3P51808 116 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 MLF1P58340 268 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 TMEM187Q14656 261 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 SHHQ15465 462 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 ZNF321PQ8N8H1 164 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 HDHD3Q9BSH5 251 aaPredicted RBP12.32□□□□□ -0.44
PCF11-204ENST00000530660 MAP1LC3BQ9GZQ8 125 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 CSTL1Q9H114 145 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 ZNF552Q9H707 407 aaPredicted RBP12.32□□□□□ -0.44
PCF11-204ENST00000530660 SEPSECSQ9HD40 501 aaKnown RBP12.32□□□□□ -0.44
PCF11-204ENST00000530660 MANSC4A6NHS7 340 aaPredicted RBP12.32□□□□□ -0.44
PCF11-204ENST00000530660 PROB1E7EW31 1015 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 NXPH3O95157 252 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 HLA-HP01893 362 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 DUSP1P28562 367 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 NUDT11Q96G61 164 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 TMEM9BQ9NQ34 198 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 CLDN16Q9Y5I7 305 aa12.32□□□□□ -0.44
PCF11-204ENST00000530660 A0A1W2PNV4 684 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 ZNF320A2RRD8 509 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 HBE1P02100 147 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 HPNP05981 417 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 CISD3P0C7P0 127 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 PLA2G5P39877 138 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 P2RY2P41231 377 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 FXYD4P59646 89 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 TMEM52BQ4KMG9 183 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 CBLN3Q6UW01 205 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 RTN4IP1Q8WWV3 396 aaPredicted RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 RPUSD4Q96CM3 377 aaKnown RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 SPACA7Q96KW9 195 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 ZNF703Q9H7S9 590 aaPredicted RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 Q9N2K0 584 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 HIDE1A8MVS5 230 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 ISG15P05161 165 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 CTSDP07339 412 aaPredicted RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 HOXB2P14652 356 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 GTF3C1Q12789 2109 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 BSXQ3C1V8 233 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 LDLRAD2Q5SZI1 272 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 OR2T10Q8NGZ9 312 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 ZNF160Q9HCG1 818 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 COA3Q9Y2R0 106 aaPredicted RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 INSL6Q9Y581 213 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 SSSCA1O60232 199 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 PDGFRLQ15198 375 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 EMC4Q5J8M3 183 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
PCF11-204ENST00000530660 OR5T1Q8NG75 326 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 OR51T1Q8NGJ9 327 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 GABRG3Q99928 467 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 HSPB9Q9BQS6 159 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 VSIRQ9H7M9 311 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 MANBALQ9NQG1 85 aa12.31□□□□□ -0.44
PCF11-204ENST00000530660 NXT1Q9UKK6 140 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms