RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 GAL3ST2Q9H3Q3 398 aa11.87□□□□□ -0.51
CAPN1-219ENST00000530495 TAS2R3Q9NYW6 316 aa11.87□□□□□ -0.51
CAPN1-219ENST00000530495 GLS2Q9UI32 602 aa11.87□□□□□ -0.51
CAPN1-219ENST00000530495 KIAA2026Q5HYC2 2103 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 TRGV10A0A0A0MS01 117 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 E9PQ18 207 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 LY6LH3BQJ8 138 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 BUB1B-PAK6H3BSN5 160 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 SULT1C4O75897 302 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 CYB5AP00167 134 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 OR2T7P0C7T2 308 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 BCL3P20749 454 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 CDK2P24941 298 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 LMO1P25800 156 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 CEACAM3P40198 252 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 ATP1B3P54709 279 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 KHDC1LQ5JSQ8 128 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 PRAMEF5Q5TYX0 476 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 C12orf73Q69YU5 71 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 MRPL41Q8IXM3 137 aaKnown RBP11.86□□□□□ -0.51
CAPN1-219ENST00000530495 BCAS4Q8TDM0 211 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 PP6455Q8WZ26 134 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 DPF1Q92782 380 aa11.86□□□□□ -0.51
CAPN1-219ENST00000530495 A0A087X0M5 115 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 A0A1B0GX30 115 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 A0A1W2PQL4 384 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-219ENST00000530495 TCRBV3S1A0A5B6 114 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 FUOMA2VDF0 154 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 METTL15A6NJ78 407 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 SH2D7A6NKC9 451 aaPredicted RBP11.85□□□□□ -0.51
CAPN1-219ENST00000530495 OOSP1A8MZH6 123 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 M0R129 80 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 SH2D1BO14796 132 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 FAM107AO95990 144 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 CALCBP10092 127 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 PRKACAP17612 351 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 EPHA2P29317 976 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 GLIPR1P48060 266 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 PRRX1P54821 245 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 MTCP1P56278 107 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 KPNB1Q14974 876 aaKnown RBP11.85□□□□□ -0.51
CAPN1-219ENST00000530495 TPTE2P1Q5T6R2 138 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 ETV3LQ6ZN32 361 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 SPATA24Q86W54 205 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 GID4Q8IVV7 300 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 PRSS35Q8N3Z0 413 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 IL4I1Q96RQ9 567 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 TBX5Q99593 518 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 ZNF286AQ9HBT8 521 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 HMG20AQ9NP66 347 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 WARS2Q9UGM6 360 aaKnown RBP11.85□□□□□ -0.51
CAPN1-219ENST00000530495 PCDHGB5Q9Y5G0 923 aa11.85□□□□□ -0.51
CAPN1-219ENST00000530495 IGKV1-9A0A0C4DH69 117 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 PSMB11A5LHX3 300 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 ZAR1LA6NP61 321 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 SIRPB1O00241 398 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 TOR1AO14656 332 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 OR2H2O95918 312 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 FAM106CPP0CH98 169 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 GDNFP39905 211 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 THBS3P49746 956 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 AESQ08117 197 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 PDZK1IP1Q13113 114 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 HLA-DRB5Q30154 266 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 C9orf152Q5JTZ5 239 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 CCDC144NLQ6NUI1 221 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 THNSL2Q86YJ6 484 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
CAPN1-219ENST00000530495 UTP4Q969X6 686 aaKnown RBP11.84□□□□□ -0.51
CAPN1-219ENST00000530495 MCRIP2Q9BUT9 160 aaKnown RBP11.84□□□□□ -0.51
CAPN1-219ENST00000530495 FAM172BPA6NC97 362 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A18PA6NE21 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A16PA6NEW6 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A20PA6NIJ5 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A9PA6NNJ1 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A12PA8MX19 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A5PA8MXJ8 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 MITFO75030 526 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-219ENST00000530495 CSN2P05814 226 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A15PP0C7V4 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A13PP0C7W8 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A14PP0C7W9 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FAM90A24PP0C7X0 464 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 ATF1P18846 271 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 PRKACBP22694 351 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 SLC6A1P30531 599 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 MNDAP41218 407 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 POU3F4P49335 361 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 SNU13P55769 128 aaKnown RBP11.83□□□□□ -0.52
CAPN1-219ENST00000530495 RPL23AP62750 156 aaKnown RBP11.83□□□□□ -0.52
CAPN1-219ENST00000530495 DCTN2Q13561 401 aaKnown RBP11.83□□□□□ -0.52
CAPN1-219ENST00000530495 FLOT2Q14254 428 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 UTS2BQ765I0 119 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 ZNF329Q86UD4 541 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 RDH10Q8IZV5 341 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 OR4D6Q8NGJ1 314 aa11.83□□□□□ -0.52
CAPN1-219ENST00000530495 RNF166Q96A37 237 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-219ENST00000530495 ADAT3Q96EY9 351 aaPredicted RBP11.83□□□□□ -0.52
CAPN1-219ENST00000530495 EXOSC4Q9NPD3 245 aaKnown RBP11.83□□□□□ -0.52
CAPN1-219ENST00000530495 KRT84Q9NSB2 600 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms