RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SOX21Q9Y651 276 aaPredicted RBP10.41□□□□□ -0.74
CCDC90B-216ENST00000529856 IGHV1-69DA0A0B4J2H0 117 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 A0A1W2PPH5 198 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 MAGEA13PA6NCF6 341 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 RNF212BA8MTL3 300 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 OR2H2O95918 312 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 IGHV1-69P01742 117 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 HSMCR30P0CW71 290 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 PRTN3P24158 256 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 MAPK3P27361 379 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 MAP2K4P45985 399 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 OR3A4PP47883 348 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 MLLT11Q13015 90 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 BLMHQ13867 455 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 INSL4Q14641 139 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 RSU1Q15404 277 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 LIPKQ5VXJ0 399 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 RUSC1-AS1Q66K80 236 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 Q6P435 159 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 GDPD3Q7L5L3 318 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 CDH26Q8IXH8 852 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 SIGLECL1Q8N7X8 197 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 OR4S1Q8NGB4 309 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 UFD1Q92890 307 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 TNFRSF14Q92956 283 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 NKX3-1Q99801 234 aaPredicted RBP10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 TMED9Q9BVK6 235 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 YTHDF1Q9BYJ9 559 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 FAM192AQ9GZU8 254 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 METTL8Q9H825 291 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 SIRT7Q9NRC8 400 aa10.4□□□□□ -0.74
CCDC90B-216ENST00000529856 A0A0G2JK05 382 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 RNASEK-C17orf49H0YIS7 233 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 SIRPB1O00241 398 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 MGST3O14880 152 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 DEGS1O15121 323 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 MRPS14O60783 128 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 SC5DO75845 299 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 CDRT1O95170 752 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 MAS1P04201 325 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 CPEP16870 476 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 GABRR1P24046 479 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 OR3A1P47881 315 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 GP2P55259 537 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 GABARAPL2P60520 117 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 SCN1BQ07699 218 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 ZNF273Q14593 569 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 TBCEQ15813 527 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 GRK1Q15835 563 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 RBMS3Q6XE24 437 aaKnown RBP10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 CEACAM19Q7Z692 300 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 LYPD6Q86Y78 171 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 PDZD9Q8IXQ8 264 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 C11orf42Q8N5U0 333 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 ZDHHC22Q8N966 263 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 CHST4Q8NCG5 386 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 OR51T1Q8NGJ9 327 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 PPP1R35Q8TAP8 253 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 ZFAND2BQ8WV99 257 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 NR1H4Q96RI1 486 aaPredicted RBP10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 MGLLQ99685 303 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 CHST6Q9GZX3 395 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 METTL9Q9H1A3 318 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 PRDM13Q9H4Q3 707 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 ACOT13Q9NPJ3 140 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 ESM1Q9NQ30 184 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 IL36GQ9NZH8 169 aa10.39□□□□□ -0.75
CCDC90B-216ENST00000529856 DSCAML1Q8TD84 2053 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 MEGF11A6BM72 1044 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 HTR3BO95264 441 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 ZNF44P15621 663 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 CCL3L1P16619 93 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 ERP29P30040 261 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 DLX1P56177 255 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 DLX6P56179 175 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 EDDM3BP56851 147 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 GUCA2AQ02747 115 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 PRB3Q04118 309 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 EMX1Q04741 257 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 MEF2CQ06413 473 aaPredicted RBP10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 EDDM3AQ14507 147 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 IL13RA2Q14627 380 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 TRAM1Q15629 374 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 DEFB112Q30KQ8 113 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 FAM27D1Q5T7N8 215 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 NCR3LG1Q68D85 454 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 PHC2Q8IXK0 858 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 JAGN1Q8N5M9 183 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 OR10K1Q8NGX5 313 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 TMEM203Q969S6 136 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 S100A13Q99584 98 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 PPIL3Q9H2H8 161 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 SF3B6Q9Y3B4 125 aaKnown RBP10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 COL6A5A8TX70 2615 aa10.38□□□□□ -0.75
CCDC90B-216ENST00000529856 MDFIC2A0A1B0GVS7 189 aa10.37□□□□□ -0.75
CCDC90B-216ENST00000529856 hCG_1809904A0A1W2PP81 198 aa10.37□□□□□ -0.75
CCDC90B-216ENST00000529856 A0A1W2PPE2 198 aa10.37□□□□□ -0.75
CCDC90B-216ENST00000529856 A0A1W2PR64 198 aa10.37□□□□□ -0.75
CCDC90B-216ENST00000529856 A0A1W2PRV1 198 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms