RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 RBFOX1Q9NWB1 397 aaKnown RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 RHBDL2Q9NX52 303 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 OR6C3Q9NZP0 311 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 SLC25A10Q9UBX3 287 aaPredicted RBP6.64□□□□□ -1.35
SSBP3-211ENST00000528787 OR14J1Q9UGF5 321 aa6.64□□□□□ -1.35
SSBP3-211ENST00000528787 TRAV20A0A0B4J274 112 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 IGHV3-64DA0A0J9YX35 117 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 hADV38S2A0JD32 116 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 DPPA5A6NC42 116 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 CEACAM18A8MTB9 384 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 A8MXK9 166 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 J3QLI3 93 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 K7N7A8 449 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 RGS5O15539 181 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 NDUFS7O75251 213 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 TACC2O95359 2948 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 GYPAP02724 150 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 TK1P04183 234 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 SFTPBP07988 381 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 GSTP1P09211 210 aaKnown RBP6.63□□□□□ -1.35
SSBP3-211ENST00000528787 WNT2P09544 360 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 VSIG8P0DPA2 414 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 GZMHP20718 246 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 GABRR1P24046 479 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 BLVRBP30043 206 aaPredicted RBP6.63□□□□□ -1.35
SSBP3-211ENST00000528787 CD80P33681 288 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 CBX5P45973 191 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 NPBWR2P48146 333 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 OR10A3P58181 314 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 MRPS10P82664 201 aaKnown RBP6.63□□□□□ -1.35
SSBP3-211ENST00000528787 SCN1BQ07699 218 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 PNLIPRP3Q17RR3 467 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 C6orf183Q5T699 404 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 Q6ZTK2 550 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 GLCCI1Q86VQ1 547 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 FAM89BQ8N5H3 189 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 LINC01356Q8N9X3 169 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 DEFB108BQ8NET1 73 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM185AQ8NFB2 350 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 MCFD2Q8NI22 146 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 SLC25A28Q96A46 364 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 ORAI1Q96D31 301 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 RAB3CQ96E17 227 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 FGF23Q9GZV9 251 aaPredicted RBP6.63□□□□□ -1.35
SSBP3-211ENST00000528787 ATG5Q9H1Y0 275 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 ABCG5Q9H222 651 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 GAL3ST2Q9H3Q3 398 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 PPP1R3EQ9H7J1 279 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 KCNIP1Q9NZI2 227 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 OPN4Q9UHM6 478 aa6.63□□□□□ -1.35
SSBP3-211ENST00000528787 POLR3KQ9Y2Y1 108 aaPredicted RBP6.63□□□□□ -1.35
SSBP3-211ENST00000528787 UBE2J1Q9Y385 318 aaPredicted RBP6.63□□□□□ -1.35
SSBP3-211ENST00000528787 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
SSBP3-211ENST00000528787 ITPR2Q14571 2701 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 IGKV1D-17A0A075B6S4 117 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 LOC105371242A0A075B767 164 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 IGHV4-30-2A0A087WSY4 118 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 TRGV10A0A0A0MS01 117 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 IGKV1-12A0A0C4DH73 117 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 A0A0G2JK05 382 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 A0A0G2JMP0 313 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 A0A0X1KG70 313 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM272A0A1B0GTI8 110 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM30CPA0ZSE6 113 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 FAM25AB3EWG3 89 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 FAM25CB3EWG5 89 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 FAM25GB3EWG6 89 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 F5H0A9 414 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 LYNX1G3V0Z9 82 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 GEMIN2O14893 280 aaKnown RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 LDLRAD4O15165 306 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 LY6HO94772 140 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 OR2H2O95918 312 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 IGKV1D-12P01611 117 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 IGHV2-5P01817 119 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 RBP4P02753 201 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 CD3GP09693 182 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 PPIAL4GP0DN37 164 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 LYNX1P0DP58 116 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 NDUFB7P17568 137 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 HNF1AP20823 631 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 PTBP1P26599 531 aaKnown RBP eCLIP6.62□□□□□ -1.351e-8■■■■■ 38.8
SSBP3-211ENST00000528787 GMFBP60983 142 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 COL10A1Q03692 680 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 GRK1Q15835 563 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 TAF9Q16594 264 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 DMRTC1Q5HYR2 192 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 SPANXN2Q5MJ10 180 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 TMEM69Q5SWH9 247 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 AVPI1Q5T686 147 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 CYB5R2Q6BCY4 276 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 SLC35E4Q6ICL7 350 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 OR52W1Q6IF63 320 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 METAP1DQ6UB28 335 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-211ENST00000528787 C1orf122Q6ZSJ8 110 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 TGIF2LYQ8IUE0 185 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 KIR3DL3Q8N743 410 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 SAMD12Q8N8I0 201 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 OR4M2Q8NGB6 313 aa6.62□□□□□ -1.35
SSBP3-211ENST00000528787 OR10A7Q8NGE5 316 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms