RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 EXOSC4Q9NPD3 245 aaKnown RBP9.17□□□□□ -0.94
CMTM1-211ENST00000528484 TVP23BQ9NYZ1 205 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 LYSTQ99698 3801 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 TRBV2A0A0J9YWF9 115 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 TCRBV5S2A0A599 114 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 FAM172BPA6NC97 362 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 BUB1B-PAK6H3BSN5 160 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 SH2D1BO14796 132 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 DCTN3O75935 186 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 RPP14O95059 124 aaKnown RBP9.16□□□□□ -0.94
CMTM1-211ENST00000528484 IGLV1-47P01700 117 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 AMY1AP04745 511 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 AMY2AP04746 511 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 KRT8P05787 483 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 ANXA8P13928 327 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 DUSP1P28562 367 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 POU3F4P49335 361 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 SNU13P55769 128 aaKnown RBP9.16□□□□□ -0.94
CMTM1-211ENST00000528484 ZNF146Q15072 292 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 ODF4Q2M2E3 257 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 HLA-DRB5Q30154 266 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 SLC35F2Q8IXU6 374 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 YIPF7Q8N8F6 280 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 OR52N4Q8NGI2 321 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 OR8U1Q8NH10 309 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 DNAJC9Q8WXX5 260 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 C10orf35Q96D05 121 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 APOL4Q9BPW4 351 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 GON7Q9BXV9 100 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 CHST5Q9GZS9 411 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 SLC25A19Q9HC21 320 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 PALMDQ9NP74 551 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 MED4Q9NPJ6 270 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 HHLA2Q9UM44 414 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 COPS3Q9UNS2 423 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 SIRT4Q9Y6E7 314 aaPredicted RBP9.16□□□□□ -0.94
CMTM1-211ENST00000528484 HUWE1Q7Z6Z7 4374 aaKnown RBP9.16□□□□□ -0.94
CMTM1-211ENST00000528484 KIAA2026Q5HYC2 2103 aa9.16□□□□□ -0.94
CMTM1-211ENST00000528484 STAB2Q8WWQ8 2551 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 A0A1B0GTI1 187 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 F8VVB4 439 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 F8VWA3 439 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 CCL24O00175 119 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 SIRPB1O00241 398 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 FGF16O43320 207 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 SNX3O60493 162 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 PSPNO60542 156 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 MMP23AO75900 390 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 FAM107AO95990 144 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 TMEM11P17152 192 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 CCL1P22362 96 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 CD34P28906 385 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 ECI1P42126 302 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 TRIM25Q14258 630 aaKnown RBP9.15□□□□□ -0.94
CMTM1-211ENST00000528484 UBE2V2Q15819 145 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 TMEM236Q5W0B7 351 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 TEX38Q6PEX7 206 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 OR9G1Q8NH87 305 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 PP6455Q8WZ26 134 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 P2RX4Q99571 388 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 ZNF286AQ9HBT8 521 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 ARL8BQ9NVJ2 186 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 RBFOX1Q9NWB1 397 aaKnown RBP9.15□□□□□ -0.94
CMTM1-211ENST00000528484 CLN6Q9NWW5 311 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 OR6C3Q9NZP0 311 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 GSTK1Q9Y2Q3 226 aa9.15□□□□□ -0.94
CMTM1-211ENST00000528484 BIRC6Q9NR09 4857 aa9.15□□□□□ -0.95
CMTM1-211ENST00000528484 EPPK1P58107 5090 aaKnown RBP9.14□□□□□ -0.95
CMTM1-211ENST00000528484 CCDC182A6NF36 153 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 PRR32B1ATL7 298 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 H3BSH0 61 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 ENTPD6O75354 484 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 SRSF10O75494 262 aaKnown RBP9.14□□□□□ -0.95
CMTM1-211ENST00000528484 SNRNP70P08621 437 aaKnown RBP9.14□□□□□ -0.95
CMTM1-211ENST00000528484 ZNF44P15621 663 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 BCL3P20749 454 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 PRKACBP22694 351 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 NFYBP25208 207 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 OR3A1P47881 315 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 MTCP1P56278 107 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 CXorf66Q5JRM2 361 aaPredicted RBP9.14□□□□□ -0.95
CMTM1-211ENST00000528484 KRBOX4Q5JUW0 171 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 PLEKHG7Q6ZR37 379 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 Q6ZSR3 168 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 LHFPL2Q6ZUX7 228 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 MEPCEQ7L2J0 689 aaKnown RBP9.14□□□□□ -0.95
CMTM1-211ENST00000528484 DNAAF1Q8NEP3 725 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 OR56B4Q8NH76 319 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 MUC7Q8TAX7 377 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 CORO2AQ92828 525 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 NOL4LQ96MY1 436 aaPredicted RBP9.14□□□□□ -0.95
CMTM1-211ENST00000528484 PRR25Q96S07 402 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 ASCL2Q99929 193 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 NEK6Q9HC98 313 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 BOLA1Q9Y3E2 137 aa9.14□□□□□ -0.95
CMTM1-211ENST00000528484 IGKV1-27A0A075B6S5 117 aa9.13□□□□□ -0.95
CMTM1-211ENST00000528484 ODAMA1E959 279 aa9.13□□□□□ -0.95
CMTM1-211ENST00000528484 ZNF729A6NN14 1252 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms