RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 KMT2BQ9UMN6 2715 aaPredicted RBP11.26□□□□□ -0.61
RBM39-243ENST00000528062 IGHV3-15A0A0B4J1V0 119 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.61
RBM39-243ENST00000528062 SCGB1D2O95969 90 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 SP1P08047 785 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 MSR1P21757 451 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 LSM6P62312 80 aaKnown RBP11.26□□□□□ -0.61
RBM39-243ENST00000528062 SGPP2Q8IWX5 399 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 C14orf79Q96F83 325 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 Q96M66 194 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 ZNF385AQ96PM9 386 aaKnown RBP11.26□□□□□ -0.61
RBM39-243ENST00000528062 SCRT1Q9BWW7 348 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 IFT22Q9H7X7 185 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 ZNF71Q9NQZ8 489 aaPredicted RBP11.26□□□□□ -0.61
RBM39-243ENST00000528062 DECR2Q9NUI1 292 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 PLEKHJ1Q9NW61 149 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 TIMM10BQ9Y5J6 103 aa11.26□□□□□ -0.61
RBM39-243ENST00000528062 ANGPTL7O43827 346 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 JTBO76095 146 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 ACAA1P09110 424 aaPredicted RBP11.25□□□□□ -0.61
RBM39-243ENST00000528062 PPT1P50897 306 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 PRSS12P56730 875 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 SNRPEP62304 92 aaKnown RBP11.25□□□□□ -0.61
RBM39-243ENST00000528062 SNAI3Q3KNW1 292 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 Q6ZS92 163 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 FADS6Q8N9I5 356 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 FAAP24Q9BTP7 215 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 EGLN1Q9GZT9 426 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 WFDC1Q9HC57 220 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 GPR173Q9NS66 373 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 ANXA10Q9UJ72 324 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 CACNA1BQ00975 2339 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 LOC102725191A0A1B0GVB3 256 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 CA11O75493 328 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 MBPP02686 304 aaPredicted RBP11.25□□□□□ -0.61
RBM39-243ENST00000528062 OR5H8P0DN80 308 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 TMEM225BP0DP42 221 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 FOLR2P14207 255 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 ACKR3P25106 362 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 OPRM1P35372 400 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 CSNK1A1P48729 337 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 FHITP49789 147 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 ZNF766Q5HY98 468 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 GJC3Q8NFK1 279 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 OR9K2Q8NGE7 335 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 SLC25A43Q8WUT9 341 aaPredicted RBP11.25□□□□□ -0.61
RBM39-243ENST00000528062 PP6455Q8WZ26 134 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 DYRK2Q92630 601 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 HIST1H2BAQ96A08 127 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 ZNF837Q96EG3 531 aaPredicted RBP11.25□□□□□ -0.61
RBM39-243ENST00000528062 S100A13Q99584 98 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 NAA11Q9BSU3 229 aaPredicted RBP11.25□□□□□ -0.61
RBM39-243ENST00000528062 NELFAQ9H3P2 528 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 SMCO4Q9NRQ5 59 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 STARD10Q9Y365 291 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 HDGFL3Q9Y3E1 203 aa11.25□□□□□ -0.61
RBM39-243ENST00000528062 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
RBM39-243ENST00000528062 RFPL3SP0C7P2 107 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 OTX1P32242 354 aaPredicted RBP11.24□□□□□ -0.61
RBM39-243ENST00000528062 PIGPP57054 158 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 H3F3AP84243 136 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 FAM3AP98173 230 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 PMP22Q01453 160 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 TSPO2Q5TGU0 170 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 Q6ZSR3 168 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.24□□□□□ -0.61
RBM39-243ENST00000528062 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 OR2M7Q8NG81 312 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 TOMM40LQ969M1 308 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 MARS2Q96GW9 593 aaKnown RBP11.24□□□□□ -0.61
RBM39-243ENST00000528062 AK3Q9UIJ7 227 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 ZNF407Q9C0G0 2248 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 SPRY1O43609 319 aaPredicted RBP11.24□□□□□ -0.61
RBM39-243ENST00000528062 P04436 131 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 IFNA4P05014 189 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 GLI4P10075 376 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 HIST1H3AP68431 136 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 SLC35A1P78382 337 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 SMCO1Q147U7 214 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 TAF9Q16594 264 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 MIDNQ504T8 468 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 RNFT1Q5M7Z0 435 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 C10orf128Q5T292 105 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 HIST2H3PS2Q5TEC6 136 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 HIST2H3AQ71DI3 136 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 C20orf196Q8IYI0 205 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 Q8NA96 180 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 OR2AE1Q8NHA4 323 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 TMEM54Q969K7 222 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 SGK3Q96BR1 496 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 GNRHR2Q96P88 292 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 ARV1Q9H2C2 271 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 ZDHHC8Q9ULC8 765 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 POMT1Q9Y6A1 747 aa11.24□□□□□ -0.61
RBM39-243ENST00000528062 IGKV1-27A0A075B6S5 117 aa11.23□□□□□ -0.61
RBM39-243ENST00000528062 M0R135 149 aa11.23□□□□□ -0.61
RBM39-243ENST00000528062 XRCC2O43543 280 aa11.23□□□□□ -0.61
RBM39-243ENST00000528062 C1QL1O75973 258 aa11.23□□□□□ -0.61
RBM39-243ENST00000528062 DIRAS3O95661 229 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms