RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PCNX2A6NKB5 2137 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 TMPRSS2O15393 492 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 DEFA4P12838 97 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 IGFBP7Q16270 282 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 SNAI3Q3KNW1 292 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 TMPRSS13Q9BYE2 586 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 AK3Q9UIJ7 227 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 IGKV1D-43A0A0B4J1Z2 117 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 OR5H1A6NKK0 313 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 F8W036 122 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 CLPSP04118 112 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 LHX2P50458 406 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 LIMK1P53667 647 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 DHRS2Q13268 280 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 SP6Q3SY56 376 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 SPACA3Q8IXA5 215 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 DUSP18Q8NEJ0 188 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 NXF2Q9GZY0 626 aaKnown RBP13.09□□□□□ -0.31
USP47-207ENST00000527733 KCNIP2Q9NS61 270 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
USP47-207ENST00000527733 BTBD17A6NE02 478 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 POM121CA8CG34 1229 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 E5RGE8 158 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 PIN1P1O15428 100 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 CPN1P15169 458 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 PLEKHA2Q9HB19 425 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 NSG2Q9Y328 171 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 FAM96BQ9Y3D0 163 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 RAB7AP51149 207 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 CLDN18P56856 261 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 SPANXN5Q5MJ07 72 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 C1orf100Q5SVJ3 147 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 RNF141Q8WVD5 230 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 WDYHV1Q96HA8 205 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 LRRC3CA6NJW4 275 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 TRDCB7Z8K6 153 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 ZNHIT1O43257 154 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 DTYMKP23919 212 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 MST1P26927 711 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 GZMKP49863 264 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 ENDOGQ14249 297 aaKnown RBP13.08□□□□□ -0.32
USP47-207ENST00000527733 LINC00596Q86U02 117 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 LYG1Q8N1E2 194 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 GBF1Q92538 1859 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 TREM2Q9NZC2 230 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 RAXQ9Y2V3 346 aa13.08□□□□□ -0.32
USP47-207ENST00000527733 DEFB108AA8MXU0 73 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 GZMHP20718 246 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 TAS2R30P59541 319 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 PPP1R1AQ13522 171 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 HNF4GQ14541 408 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 PXT1Q8NFP0 134 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 ZNRF4Q8WWF5 429 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 FBXW5Q969U6 566 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 CIB3Q96Q77 187 aaPredicted RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 PRO3102Q9H379 93 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 S100A7P31151 101 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 ZNF79Q15937 498 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 NRN1LQ496H8 165 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 FAM213BQ8TBF2 198 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 LIPGQ9Y5X9 500 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 ONECUT2O95948 504 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 RBM11P57052 281 aaKnown RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 NKX6-1P78426 367 aaPredicted RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 ZNF816Q0VGE8 651 aaPredicted RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 PEA15Q15121 130 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 KCNMB1Q16558 191 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 ZNF362Q5T0B9 420 aaPredicted RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 S100PBPQ96BU1 408 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 DIRC2Q96SL1 478 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 ONECUT1Q9UBC0 465 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 J3QW42 95 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 TAAR5O14804 337 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 ATXN7O15265 892 aaPredicted RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 LMX1BO60663 402 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 ZNF205O95201 554 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 PRF1P14222 555 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 SURF2Q15527 256 aaPredicted RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 ADAM5Q6NVV9 412 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 FAM57AQ8TBR7 257 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 MRPL13Q9BYD1 178 aaKnown RBP13.07□□□□□ -0.32
USP47-207ENST00000527733 UBTD1Q9HAC8 227 aa13.07□□□□□ -0.32
USP47-207ENST00000527733 SSSCA1O60232 199 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 KRASP01116 189 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 HBE1P02100 147 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 RPL12P30050 165 aaKnown RBP13.06□□□□□ -0.32
USP47-207ENST00000527733 CCL8P80075 99 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 TLE4Q04727 773 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 ABLIM2Q6H8Q1 611 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 PPP1R3EQ9H7J1 279 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 ZNF665Q9H7R5 613 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 KLK13Q9UKR3 277 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 TMED3Q9Y3Q3 217 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 CACNA1BQ00975 2339 aa13.06□□□□□ -0.32
USP47-207ENST00000527733 SFT2D2O95562 160 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms