RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ZFAND1Q8TCF1 268 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 RXFP4Q8TDU9 374 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 DTD1Q8TEA8 209 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 FAM172AQ8WUF8 416 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 DCAKDQ8WVC6 231 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 KCTD4Q8WVF5 259 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TWIST2Q8WVJ9 160 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TNFAIP8L1Q8WVP5 186 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 NELFBQ8WX92 580 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 CACNG8Q8WXS5 425 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ACOT12Q8WYK0 555 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 RAB8BQ92930 207 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 YIPF5Q969M3 257 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC25A46Q96AG3 418 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 DUS3LQ96G46 650 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 MRPL48Q96GC5 212 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SNF8Q96H20 258 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 BTF3L4Q96K17 158 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 PGLYRP3Q96LB9 341 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TMEM56Q96MV1 263 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 MBOAT7Q96N66 472 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TSNAXQ99598 290 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 EBNA1BP2Q99848 306 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 AIF1LQ9BQI0 150 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ACBD6Q9BR61 282 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TIPINQ9BVW5 301 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 KIFC1Q9BW19 673 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF717Q9BY31 904 aaPredicted RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 PECRQ9BY49 303 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TBL1XR1Q9BZK7 514 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 BCL2L14Q9BZR8 327 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC19A3Q9BZV2 496 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SLIRPQ9GZT3 109 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ARL6Q9H0F7 186 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC38A1Q9H2H9 487 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TRABDQ9H4I3 376 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 DHX35Q9H5Z1 703 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 LRRC19Q9H756 370 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 KIR3DX1Q9H7L2 352 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 METTL8Q9H825 291 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 C12orf10Q9HB07 376 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 RHOFQ9HBH0 211 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 RDH14Q9HBH5 336 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 CSNK1G1Q9HCP0 422 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 CD209Q9NNX6 404 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 RRAGDQ9NQL2 400 aaPredicted RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 XPNPEP1Q9NQW7 623 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 FBXO8Q9NRD0 319 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TREX1Q9NSU2 369 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 FKBP14Q9NWM8 211 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 C1orf109Q9NX04 203 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 EURLQ9NYK6 297 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 DNAJC27Q9NZQ0 273 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 CLEC2DQ9UHP7 191 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 MRM2Q9UI43 246 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 DKKL1Q9UK85 242 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 GUCA1BQ9UMX6 200 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 CFL2Q9Y281 166 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 RCL1Q9Y2P8 373 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TSSC4Q9Y5U2 329 aaPredicted RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ALG5Q9Y673 324 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 EIF4G1Q04637 1599 aaKnown RBP0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 TTC21AQ8NDW8 1320 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 RAB3GAP2Q9H2M9 1393 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 JCADQ9P266 1359 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 PTPRTO14522 1441 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 ADAMTS13Q76LX8 1427 aa0.81□□□□□ -2.28
ECHDC1-219ENST00000526299 AQRO60306 1485 aaKnown RBP eCLIP0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 ATP10AO60312 1499 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 SMIM26A0A096LP01 95 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 TGIF2-C20orf24A0A0A6YYL0 155 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 IGLV1-36A0A0B4J1U3 117 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 TRAV8-4A0A0B4J246 113 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 IGHV1-3A0A0C4DH29 117 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 A0A0J9YXV3 536 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 A0A1B0GV72 72 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 FAM240AA0A1B0GVK7 77 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 GNG14A0A1W2PPG7 69 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 VPS37CA5D8V6 355 aaPredicted RBP0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 GMNCA6NCL1 334 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 METTL15A6NJ78 407 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 OR5H1A6NKK0 313 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 IQCF5A8MTL0 148 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 KRBOX1C9JBD0 128 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 C9JQL5 133 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 D6RAR5 112 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 NDUFC2-KCTD14E9PQ53 114 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 H3BP45 60 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 H7C1H1 209 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 M0QXV9 152 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 ZNF593O00488 134 aaPredicted RBP0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 PSPHP1O15172 72 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 SOCS1O15524 211 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 FABP7O15540 132 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 ERI3O43414 337 aaKnown RBP0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 KDELR3O43731 214 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 SLC37A4O43826 429 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 MPZL2O60487 215 aa0.8□□□□□ -2.28
ECHDC1-219ENST00000526299 HPGDSO60760 199 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms