RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 LPLP06858 475 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 ATP6V1B1P15313 513 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 CRHBPP24387 322 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 DUSP1P28562 367 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 SNU13P55769 128 aaKnown RBP5.28□□□□□ -1.56
CD44-221ENST00000526000 OR12D2P58182 307 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 TAS2R43P59537 309 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 PSMA6P60900 246 aaKnown RBP5.28□□□□□ -1.56
CD44-221ENST00000526000 SLC35A2P78381 396 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 CD83Q01151 205 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 BDH1Q02338 343 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 COL10A1Q03692 680 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 CD69Q07108 199 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 RIPPLY1Q0D2K3 151 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 ST3GAL4Q11206 333 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 EDDM3AQ14507 147 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 ODF4Q2M2E3 257 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 CEACAM21Q3KPI0 293 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 KCTD21Q4G0X4 260 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 CCDC58Q4VC31 144 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 TCTEX1D4Q5JR98 221 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 FDX2Q6P4F2 183 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 BAIAP2L2Q6UXY1 529 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 PRSS48Q7RTY5 328 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 FTMTQ8N4E7 242 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 SVOPQ8N4V2 548 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 WFDC9Q8NEX5 89 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 OR5A2Q8NGI9 324 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 OR52I1Q8NGK6 324 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 OR13D1Q8NGV5 346 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 OR52N1Q8NH53 320 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 TRMT10AQ8TBZ6 339 aaKnown RBP5.28□□□□□ -1.56
CD44-221ENST00000526000 MALSU1Q96EH3 234 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 NR1H4Q96RI1 486 aaPredicted RBP5.28□□□□□ -1.56
CD44-221ENST00000526000 WNT10AQ9GZT5 417 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 PBOV1Q9GZY1 135 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 AMBNQ9NP70 447 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 ERVK13-1Q9NX77 482 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 ING3Q9NXR8 418 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 IKZF2Q9UKS7 526 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 ERGIC3Q9Y282 383 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 MYRFQ9Y2G1 1151 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 LRP12Q9Y561 859 aa5.28□□□□□ -1.56
CD44-221ENST00000526000 A0A0U1RQV5 110 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 A0A1W2PPH5 198 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 DHRS7CA6NNS2 312 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 C17orf98A8MV24 154 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 PRR32B1ATL7 298 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 F8VVB4 439 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 F8VWA3 439 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 MYL12BO14950 172 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 MMP23AO75900 390 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 CD1AP06126 327 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 CHRM2P08172 466 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 LIMS3P0CW19 117 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 LIMS4P0CW20 117 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ZNF728P0DKX0 622 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 CCR9P51686 369 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 GBX2P52951 348 aaPredicted RBP5.27□□□□□ -1.57
CD44-221ENST00000526000 DLX6P56179 175 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 MFGE8Q08431 387 aaPredicted RBP5.27□□□□□ -1.57
CD44-221ENST00000526000 AANATQ16613 207 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 SMN1Q16637 294 aaKnown RBP5.27□□□□□ -1.57
CD44-221ENST00000526000 SMIM21Q3B7S5 101 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ABCA11PQ4W5N1 156 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ZNF684Q5T5D7 378 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 LAIR2Q6ISS4 152 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 C18orf65Q6ZTR6 163 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 AHSA2Q719I0 299 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 Q8N2B8 174 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ZNF561Q8N587 486 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ZNF676Q8N7Q3 588 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 DTX3Q8N9I9 347 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 POC1AQ8NBT0 407 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 WIPF2Q8TF74 440 aaPredicted RBP5.27□□□□□ -1.57
CD44-221ENST00000526000 FCGR1BQ92637 280 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 THRSPQ92748 146 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ASCL2Q99929 193 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ZNF649Q9BS31 505 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ALG8Q9BVK2 526 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 MND1Q9BWT6 205 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 CHST6Q9GZX3 395 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 VCX3AQ9NNX9 186 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ABCB9Q9NP78 766 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 ISYNA1Q9NPH2 558 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 RASL12Q9NYN1 266 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 NUFIP1Q9UHK0 495 aaKnown RBP5.27□□□□□ -1.57
CD44-221ENST00000526000 COPS3Q9UNS2 423 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 SLC22A13Q9Y226 551 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 SNX5Q9Y5X3 404 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 R4GMQ9 66 aa5.27□□□□□ -1.57
CD44-221ENST00000526000 A0A087WXM4 84 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 TMEM82A0PJX8 343 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 OR5B21A6NL26 309 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 VGLL3A8MV65 326 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 ODF3BA8MYP8 253 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 PTGES3LE9PB15 166 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 LOC110117498-PIK3R3F6TDL0 507 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 HTR1AP08908 422 aa5.26□□□□□ -1.57
CD44-221ENST00000526000 UBCP0CG48 685 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms