RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 I3L4J1 428 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 K7EMT4 169 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SULT2B1O00204 365 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 PIRO00625 290 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 FABP7O15540 132 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 MBTPS2O43462 519 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 UGT2B11O75310 529 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 HCKP08631 526 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 OR5AL1P0C617 328 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SCGB1A1P11684 91 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 IL9P15248 144 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 GABRG2P18507 467 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SDC1P18827 310 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 ELK4P28324 431 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 HTR1EP28566 365 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 RPL5P46777 297 aaKnown RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 TTPAP49638 278 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SULT1A1P50225 295 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SULT1A2P50226 295 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 UBE2E1P51965 193 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 LIM2P55344 173 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 RPL32P62910 135 aaKnown RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 PSPHP78330 225 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SNRNP35Q16560 246 aaKnown RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 MRGPRG-AS1Q2M3A8 158 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 HLA-DRB5Q30154 266 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 LINC00242Q5T6M2 205 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 TPTE2P1Q5T6R2 138 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 EPGNQ6UW88 154 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 TMEM150AQ86TG1 271 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 GPD1LQ8N335 351 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 LRRC25Q8N386 305 aaPredicted RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 SPICQ8N5J4 248 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 ZNF557Q8N988 423 aaPredicted RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 BEST4Q8NFU0 473 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 TMEM234Q8WY98 164 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 FGGYQ96C11 551 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 MED8Q96G25 268 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 WBP1Q96G27 269 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SFRP2Q96HF1 295 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 UBE2E2Q96LR5 201 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 DOK1Q99704 481 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 KCTD14Q9BQ13 255 aaPredicted RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 CHCHD5Q9BSY4 110 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 LRRC61Q9BV99 259 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 SLC19A3Q9BZV2 496 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 NMUR2Q9GZQ4 415 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 ALX4Q9H161 411 aaPredicted RBP3.71□□□□□ -1.82
CD44-220ENST00000525688 LIME1Q9H400 295 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 MAP1LC3AQ9H492 121 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 TAS2R13Q9NYV9 303 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 VPREB3Q9UKI3 123 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 FBXO7Q9Y3I1 522 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 OR51B2Q9Y5P1 312 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 CACNA1AO00555 2505 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 ANK1P16157 1881 aa3.71□□□□□ -1.82
CD44-220ENST00000525688 FRYLO94915 3013 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 PTPRJQ12913 1337 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 VWA8A3KMH1 1905 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 ISPDA4D126 451 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 CLDN24A6NM45 220 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 SYCE1LA8MT33 242 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 A8MXK9 166 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 OR11H12B2RN74 326 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 LOC110117498-PIK3R3F6TDL0 507 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 C15orf65H3BRN8 121 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 M0R1B8 84 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 TAAR5O14804 337 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 ARPC5O15511 151 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 RAD51CO43502 376 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 PTTG1O95997 202 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 HAND1O96004 215 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 ARG1P05089 322 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 FCGR3AP08637 254 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 TFPTP0C1Z6 253 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 ICAM2P13598 275 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 BCL3P20749 454 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 SLC2A5P22732 501 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 LMO2P25791 158 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 FABP6P51161 128 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 DLX1P56177 255 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 TCL1AP56279 114 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 PPP1CBP62140 327 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 SLC25A11Q02978 314 aaKnown RBP3.7□□□□□ -1.82
CD44-220ENST00000525688 PNOCQ13519 176 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 APOFQ13790 326 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 OR1Q1Q15612 314 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 ZNF726P1Q15940 193 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 C4orf26Q17RF5 130 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 GPRC6AQ5T6X5 926 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 APOOLQ6UXV4 268 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 TFAP2EQ6VUC0 442 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 CYHR1Q6ZMK1 362 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 ARRDC1Q8N5I2 433 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 CLDN22Q8N7P3 220 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 HSD17B11Q8NBQ5 300 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 OR11H1Q8NG94 326 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 OR4K17Q8NGC6 315 aa3.7□□□□□ -1.82
CD44-220ENST00000525688 OR11H2Q8NH07 326 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms