RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF799Q96GE5 643 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 MOB1AQ9H8S9 216 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 DMRT1Q9Y5R6 373 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 ZFHX4Q86UP3 3567 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 IGHV1OR21-1A0A087WYE8 117 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 A0A1W2PR80 420 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF729A6NN14 1252 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-202ENST00000524773 C10orf142B7Z368 130 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 MMP9P14780 707 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 FGF8P55075 233 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-202ENST00000524773 ENDOGQ14249 297 aaKnown RBP11.42□□□□□ -0.58
CAPN1-202ENST00000524773 C14orf144Q96I85 54 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 BOD1Q96IK1 185 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 PRDM13Q9H4Q3 707 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 UCK1Q9HA47 277 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 NECAP2Q9NVZ3 263 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 HLA-HP01893 362 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 CCL1P22362 96 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 DUSP1P28562 367 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 PTGDSP41222 190 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 NKAIN1Q4KMZ8 207 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF880Q6PDB4 577 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 ANKRD37Q7Z713 158 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 OR2C3Q8N628 320 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF610Q8N9Z0 462 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 C18orf12Q96KH6 178 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 CHRNA10Q9GZZ6 450 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 HSF4Q9ULV5 492 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 LILRA5A6NI73 299 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 PROB1E7EW31 1015 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 CD38P28907 300 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 GUCA1AP43080 201 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-202ENST00000524773 DYNLT3P51808 116 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 UCP2P55851 309 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 OR2T2Q6IF00 324 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 D2HGDHQ8N465 521 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 FRZBQ92765 325 aa11.41□□□□□ -0.58
CAPN1-202ENST00000524773 A0A1W2PNV4 684 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 ZFP92A6NM28 416 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 ADAM20O43506 726 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 SRP19P09132 144 aaKnown RBP11.4□□□□□ -0.58
CAPN1-202ENST00000524773 NDUFB7P17568 137 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 GNMTQ14749 295 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 MPV17LQ2QL34 196 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF774Q6NX45 483 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 SNX22Q96L94 193 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 HS3ST6Q96QI5 342 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 TM2D1Q9BX74 207 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 NPBWR2P48146 333 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 ICAM4Q14773 271 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 OR6X1Q8NH79 312 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 GPR27Q9NS67 375 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 GNG13Q9P2W3 67 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 ST3GAL6Q9Y274 331 aa11.4□□□□□ -0.58
CAPN1-202ENST00000524773 ESPL1Q14674 2120 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 WRBO00258 174 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 TERTO14746 1132 aaKnown RBP11.4□□□□□ -0.59
CAPN1-202ENST00000524773 OR7C1O76099 320 aaPredicted RBP11.4□□□□□ -0.59
CAPN1-202ENST00000524773 LCATP04180 440 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 TRGC1P0CF51 173 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 GRB2P62993 217 aaKnown RBP11.4□□□□□ -0.59
CAPN1-202ENST00000524773 NECAP1Q8NC96 275 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 NFAM1Q8NET5 270 aaPredicted RBP11.4□□□□□ -0.59
CAPN1-202ENST00000524773 OXGR1Q96P68 337 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF442Q9H7R0 627 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 CALHM2Q9HA72 323 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 CRLF2Q9HC73 371 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 TREM2Q9NZC2 230 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 IL36RNQ9UBH0 155 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 WSB1Q9Y6I7 421 aa11.4□□□□□ -0.59
CAPN1-202ENST00000524773 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 MSR1P21757 451 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 LMO1P25800 156 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 PMELP40967 661 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 RAB11AP62491 216 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 ODF3L1Q8IXM7 274 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 ZNF501Q96CX3 271 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-202ENST00000524773 MALSU1Q96EH3 234 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 METTL9Q9H1A3 318 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 VSIRQ9H7M9 311 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 IFNL4K9M1U5 179 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 YKT6O15498 198 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 IGHV3-9P01782 118 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 CD55P08174 381 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 RPL23AP62750 156 aaKnown RBP11.39□□□□□ -0.59
CAPN1-202ENST00000524773 IGFBP7Q16270 282 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-202ENST00000524773 LCN15Q6UWW0 184 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 SLC16A14Q7RTX9 510 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 LGI3Q8N145 548 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 INTS12Q96CB8 462 aaKnown RBP11.39□□□□□ -0.59
CAPN1-202ENST00000524773 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-202ENST00000524773 UBE2J1Q9Y385 318 aaPredicted RBP11.39□□□□□ -0.59
CAPN1-202ENST00000524773 KIAA2026Q5HYC2 2103 aa11.39□□□□□ -0.59
CAPN1-202ENST00000524773 HMGB3O15347 200 aaKnown RBP11.38□□□□□ -0.59
CAPN1-202ENST00000524773 SELLP14151 372 aa11.38□□□□□ -0.59
CAPN1-202ENST00000524773 FUT3P21217 361 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms