RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 OR2K2Q8NGT1 345 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 OR6N2Q8NGY6 317 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 DOK4Q8TEW6 326 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 CCL17Q92583 94 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 CIDECQ96AQ7 238 aaPredicted RBP0.94□□□□□ -2.26
PCM1-217ENST00000522998 FXYD5Q96DB9 178 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 ZNF75AQ96N20 296 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 YPEL4Q96NS1 127 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 ANP32EQ9BTT0 268 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 PORCNQ9H237 461 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 PLEKHA1Q9HB21 404 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 SDHAF3Q9NRP4 125 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 VAPAQ9P0L0 249 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 MMACHCQ9Y4U1 282 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 FADS3Q9Y5Q0 445 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 V9GYY9 64 aa0.94□□□□□ -2.26
PCM1-217ENST00000522998 BRD4O60885 1362 aaPredicted RBP0.94□□□□□ -2.26
PCM1-217ENST00000522998 ZNF638Q14966 1978 aaKnown RBP0.94□□□□□ -2.26
PCM1-217ENST00000522998 A0A1B0GXF2 115 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 A0A1W2PNM2 257 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 MYBPHLA2RUH7 354 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 A8MWP4 228 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 E7EWF7 191 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 F5H5P2 479 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 K7EN84 100 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 K7ERS5 55 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 RFXANKO14593 260 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 RGS5O15539 181 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 PSCAO43653 123 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 SYNGR2O43760 224 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 COX7A2P2O60397 106 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 RLN2P04090 185 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 STAG3L2P0CL84 134 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 CGB3P0DN86 165 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 CGB7P0DN87 165 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 PRPS1L1P21108 318 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 ELK4P28324 431 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 HTR2CP28335 458 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 TMEM241Q24JQ0 296 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 HNRNPA1L2Q32P51 320 aaKnown RBP0.93□□□□□ -2.26
PCM1-217ENST00000522998 TMPPEQ6ZT21 453 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 FAM19A1Q7Z5A9 133 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 LYPD6Q86Y78 171 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 FAM58AQ8N1B3 248 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 SYS1Q8N2H4 156 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 Q8NAQ8 132 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 OR2M3Q8NG83 312 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 PHOSPHO2Q8TCD6 241 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 MITD1Q8WV92 249 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 CACNG8Q8WXS5 425 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 APOBEC3DQ96AK3 386 aaPredicted RBP0.93□□□□□ -2.26
PCM1-217ENST00000522998 ADTRPQ96IZ2 230 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 TRIB3Q96RU7 358 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 TM6SF2Q9BZW4 377 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 SYT4Q9H2B2 425 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 RHOFQ9HBH0 211 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 ACOT13Q9NPJ3 140 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 RBM12B-AS1Q9P1G2 102 aa0.93□□□□□ -2.26
PCM1-217ENST00000522998 NRCAMQ92823 1304 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 TVP23AA6NH52 213 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 C3orf84H3BNL1 204 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 CDS2O95674 445 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 IGKV1D-33P01593 117 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 IGKV1-33P01594 117 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 MLNP12872 115 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 ATP5J2P56134 94 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 WDR43Q15061 677 aaKnown RBP eCLIP0.92□□□□□ -2.26
PCM1-217ENST00000522998 VAMP3Q15836 100 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 LGALSLQ3ZCW2 172 aaPredicted RBP0.92□□□□□ -2.26
PCM1-217ENST00000522998 UBE2NLQ5JXB2 153 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 SLC25A25Q6KCM7 469 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 ZNF773Q6PK81 442 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 PID1Q7Z2X4 250 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 LYZL2Q7Z4W2 148 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 DPPA2Q7Z7J5 298 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 CYP4Z1Q86W10 505 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 ZNF738Q8NE65 137 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 OR6K2Q8NGY2 324 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 RAD51AP1Q96B01 352 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 SLC25A44Q96H78 314 aaPredicted RBP0.92□□□□□ -2.26
PCM1-217ENST00000522998 BIRC8Q96P09 236 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 STACQ99469 402 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 HIGD2AQ9BW72 106 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 NXF2Q9GZY0 626 aaKnown RBP0.92□□□□□ -2.26
PCM1-217ENST00000522998 ANKHQ9HCJ1 492 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 SDHAF2Q9NX18 166 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 STMN3Q9NZ72 180 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 DNAJC27Q9NZQ0 273 aa0.92□□□□□ -2.26
PCM1-217ENST00000522998 ZNF706Q9Y5V0 76 aaPredicted RBP0.92□□□□□ -2.26
PCM1-217ENST00000522998 IGKV1D-37A0A075B6S9 117 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 A0A0B4J2C4 111 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 RBFOX3A6NFN3 312 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 H3BMM0 161 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 ZNF73O43830 326 aaPredicted RBP0.91□□□□□ -2.26
PCM1-217ENST00000522998 PDYNP01213 254 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 OPN1SWP03999 348 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 SOD3P08294 240 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 PRTN3P24158 256 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 GCLMP48507 274 aa0.91□□□□□ -2.26
PCM1-217ENST00000522998 TTPAP49638 278 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms