RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 EXTL1Q92935 676 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MOB3AQ96BX8 217 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 POM121L2Q96KW2 1035 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF552Q9H707 407 aaPredicted RBP9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 C12orf49Q9H741 205 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZC4H2Q9NQZ6 224 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 GLS2Q9UI32 602 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ASPMQ8IZT6 3477 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF732B4DXR9 585 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LILRA1O75019 489 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SS18L1O75177 396 aaPredicted RBP9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RPL12P30050 165 aaKnown RBP9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZDHHC23Q8IYP9 409 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 Q8NFD4 153 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 APOBEC3DQ96AK3 386 aaPredicted RBP9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LOXL4Q96JB6 756 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PCDHB16Q9NRJ7 776 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MTCH1Q9NZJ7 389 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 KCNIP3Q9Y2W7 256 aa9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TNRC6AQ8NDV7 1962 aaKnown RBP9.24□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RAB19A4D1S5 217 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MBPP02686 304 aaPredicted RBP9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 COX5BP10606 129 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ADCYAP1P18509 176 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ATF4P18848 351 aaPredicted RBP9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TGIF1Q15583 401 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 HIKESHIQ53FT3 197 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CLEC9AQ6UXN8 241 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CCDC36Q8IYA8 594 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR5T2Q8NGG2 359 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR4A4PQ8NGN8 299 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LHFPL5Q8TAF8 219 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 GLYATL2Q8WU03 294 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PRRX2Q99811 253 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SMIM3Q9BZL3 60 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 DEFB127Q9H1M4 99 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR51B6Q9H340 312 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FBXL17Q9UF56 701 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF705EA8MWA4 302 aaPredicted RBP9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 K7EPK0 472 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 HSPB6O14558 160 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ABCD4O14678 606 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 BET1O15155 118 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SYNGR1O43759 233 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LRP3O75074 770 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 DIRAS3O95661 229 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 DUSP1P28562 367 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 GLP1RP43220 463 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 IGFBP7Q16270 282 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CEACAM21Q3KPI0 293 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RNFT1Q5M7Z0 435 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MCEMP1Q8IX19 187 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FAM71E2Q8N5Q1 922 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 MSI2Q96DH6 328 aaKnown RBP9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 BSCL2Q96G97 398 aaPredicted RBP9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RNF122Q9H9V4 155 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TAF9BQ9HBM6 251 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 KLF13Q9Y2Y9 288 aaPredicted RBP9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 AMDHD2Q9Y303 409 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TMEM218A2RU14 115 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 DNASE2O00115 360 aaPredicted RBP9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CST4P01036 141 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PPYP01298 95 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 WNT5AP41221 380 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 UQCC3Q6UW78 93 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 WNT2BQ93097 391 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ERGIC1Q969X5 290 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 C18orf12Q96KH6 178 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ZNF488Q96MN9 340 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TP53RKQ96S44 253 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TMEM231Q9H6L2 316 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 LPAR3Q9UBY5 353 aa9.23□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FAM74A7A6NL05 159 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PHF1O43189 567 aaPredicted RBP9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 IL18BPO95998 194 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TMEM33P57088 247 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FGF12P61328 243 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 HERV-K104P61576 105 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SMCO1Q147U7 214 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RNPS1Q15287 305 aaKnown RBP9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TSC22D1Q15714 1073 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FAM74A3Q4VXF1 159 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 VASH2Q86V25 355 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 OR52M1Q8NGK5 317 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ARL11Q969Q4 196 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 RSRP1Q9BUV0 290 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 SUCNR1Q9BXA5 334 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 CD300LBA8K4G0 201 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 H7C1Q1 480 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TRIM77I1YAP6 450 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 TAAR5O14804 337 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 FBXO24O75426 580 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 ARR3P36575 388 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 PMELP40967 661 aa9.22□□□□□ -0.93
RAB11FIP1-204ENST00000522774 UCP3P55916 312 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms