RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 DUX4L6P0CJ89 424 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 DUX4L7P0CJ90 424 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 CHATP28329 748 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 MPV17LQ2QL34 196 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 CDNFQ49AH0 187 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 SPIN3Q5JUX0 258 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 STUMQ69YW2 141 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 DUX4L9Q6RFH8 374 aaPredicted RBP11.19□□□□□ -0.62
CLK4-210ENST00000522136 FIP1L1Q6UN15 594 aaKnown RBP11.19□□□□□ -0.62
CLK4-210ENST00000522136 Q6ZTK2 550 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 BPIFB2Q8N4F0 458 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 ANGPTL6Q8NI99 470 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 DYRK2Q92630 601 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 NEDD4LQ96PU5 975 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 FAAP24Q9BTP7 215 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 PECRQ9BY49 303 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 CHODLQ9H9P2 273 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 TMEM165Q9HC07 324 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 DUX4Q9UBX2 424 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 UBE2QL1A1L167 161 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 CLDN25C9JDP6 229 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 PDCD6O75340 191 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 SELLP14151 372 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 FUT3P21217 361 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 ETV6P41212 452 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 BTG1P62324 171 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 COL10A1Q03692 680 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 FAM189A2Q15884 450 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 ZNF79Q15937 498 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 ZNF260Q3ZCT1 412 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 RNASE12Q5GAN4 147 aaKnown RBP11.19□□□□□ -0.62
CLK4-210ENST00000522136 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 LYPD2Q6UXB3 125 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 LINC00299Q6ZSB3 139 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 SUMF2Q8NBJ7 301 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 CCL13Q99616 98 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 SULT4A1Q9BR01 284 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 PLEKHJ1Q9NW61 149 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 ZNF222Q9UK12 451 aa11.19□□□□□ -0.62
CLK4-210ENST00000522136 TRAV38-1A0A0B4J264 116 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A10PA6NDY2 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A18PA6NE21 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A16PA6NEW6 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A20PA6NIJ5 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A8PA6NJQ4 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A7PA6NKC0 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A22PA8MWA6 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A12PA8MX19 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A5PA8MXJ8 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A23PA8MXZ1 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 SLC33A1O00400 549 aaPredicted RBP11.18□□□□□ -0.62
CLK4-210ENST00000522136 PSPNO60542 156 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A15PP0C7V4 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A13PP0C7W8 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A14PP0C7W9 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 FAM90A24PP0C7X0 464 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 MUC1P15941 1255 aaPredicted RBP11.18□□□□□ -0.62
CLK4-210ENST00000522136 HIST1H1DP16402 221 aaKnown RBP11.18□□□□□ -0.62
CLK4-210ENST00000522136 LINC00596Q86U02 117 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 ZNRF1Q8ND25 227 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 TMEM246Q9BRR3 403 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 CHST6Q9GZX3 395 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 PPA2Q9H2U2 334 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 AUNIPQ9H7T9 357 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 GLS2Q9UI32 602 aa11.18□□□□□ -0.62
CLK4-210ENST00000522136 ANKRD17O75179 2603 aaKnown RBP11.18□□□□□ -0.62
CLK4-210ENST00000522136 A0A0A6YYH2 397 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 TMEM82A0PJX8 343 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 ISPDA4D126 451 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 A6NJ64 397 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 J3QRK9 145 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 MFNGO00587 321 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 SCGNO76038 276 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 IGHV2-70P01814 119 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 ING3Q9NXR8 418 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 RCC2Q9P258 522 aaKnown RBP11.17□□□□□ -0.62
CLK4-210ENST00000522136 MAB21L2Q9Y586 359 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 APCP25054 2843 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 NBPF19A0A087WUL8 3843 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 MEIOCA2RUB1 952 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 TNFRSF13BO14836 293 aaPredicted RBP11.17□□□□□ -0.62
CLK4-210ENST00000522136 TMEM33P57088 247 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 ZNF45Q02386 682 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 PYDC2Q56P42 97 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 PAN3Q58A45 887 aaKnown RBP11.17□□□□□ -0.62
CLK4-210ENST00000522136 C17orf107Q6ZR85 190 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 PEG10Q86TG7 708 aaKnown RBP11.17□□□□□ -0.62
CLK4-210ENST00000522136 FGFRL1Q8N441 504 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 ASCC1Q8N9N2 400 aaKnown RBP11.17□□□□□ -0.62
CLK4-210ENST00000522136 OR4S1Q8NGB4 309 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 S100ZQ8WXG8 99 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 POM121Q96HA1 1249 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 GAFA1Q96PS6 74 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
CLK4-210ENST00000522136 DPCDQ9BVM2 203 aaPredicted RBP11.17□□□□□ -0.62
CLK4-210ENST00000522136 GSX2Q9BZM3 304 aa11.17□□□□□ -0.62
CLK4-210ENST00000522136 NARFLQ9H6Q4 476 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms