RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 OR5L1Q8NGL2 311 aa8.39□□□□□ -1.07
CTNNA1-230ENST00000521724 TMEM171Q8WVE6 324 aa8.39□□□□□ -1.07
CTNNA1-230ENST00000521724 ELSPBP1Q96BH3 223 aa8.39□□□□□ -1.07
CTNNA1-230ENST00000521724 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-230ENST00000521724 ELL3Q9HB65 397 aaPredicted RBP8.39□□□□□ -1.07
CTNNA1-230ENST00000521724 TDRD6O60522 2096 aaKnown RBP8.39□□□□□ -1.07
CTNNA1-230ENST00000521724 ZFP92A6NM28 416 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 ZNF850A8MQ14 1090 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 NPIPA5E9PKD4 350 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 M0QZK8 103 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 GGCTO75223 188 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 PITX3O75364 302 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 SCGB1D1O95968 90 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 GP1BBP13224 206 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 MMP9P14780 707 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 LBX1P52954 281 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 RPS21P63220 83 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 RUNX1Q01196 453 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 CLN3Q13286 438 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 GPM6BQ13491 265 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 LIAT1Q6ZQX7 453 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 C1QL2Q7Z5L3 287 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 NOXO1Q8NFA2 376 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 OR5C1Q8NGR4 320 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 GNPNAT1Q96EK6 184 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 NXF5Q9H1B4 397 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 DECR2Q9NUI1 292 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 PLEKHJ1Q9NW61 149 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 NXT1Q9UKK6 140 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 MCTS1Q9ULC4 181 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 NPIPA1Q9UND3 350 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 IGSF23A1L1A6 192 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 ONECUT2O95948 504 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 IGHMP01871 453 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 IDH3GP51553 393 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 WDR25Q64LD2 544 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 NCR3LG1Q68D85 454 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 BTNL3Q6UXE8 466 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 ZNF705AQ6ZN79 300 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 PRR18Q8N4B5 295 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 SUMF1Q8NBK3 374 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 OR10G4Q8NGN3 311 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 C18orf12Q96KH6 178 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 HDHD3Q9BSH5 251 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 CALHM2Q9HA72 323 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 ANXA10Q9UJ72 324 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 LAMP3Q9UQV4 416 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 RP1P56715 2156 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 TMED7-TICAM2A0A0A6YYA0 188 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 LOC102723971A0A1B0GUV8 181 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 TMEM210A6NLX4 147 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 PPP5D1E7EU14 171 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 RRP8O43159 456 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 GNG10P50151 68 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 VAMP2P63027 116 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 FOXF1Q12946 379 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 KISS1Q15726 138 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 MPV17LQ2QL34 196 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 C1orf194Q5T5A4 169 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 CDCP2Q5VXM1 449 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 SP5Q6BEB4 398 aaPredicted RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 ZNF774Q6NX45 483 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 MEX3BQ6ZN04 569 aaKnown RBP8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 TMEM217Q8N7C4 229 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 LRTM2Q8N967 370 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 NECAP1Q8NC96 275 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 OR5L2Q8NGL0 311 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 OR2AJ1Q8NGZ0 328 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 ACY3Q96HD9 319 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 CTDSP1Q9GZU7 261 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 LIME1Q9H400 295 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 SDF2L1Q9HCN8 221 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 SLC2A9Q9NRM0 540 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 SEMA5BQ9P283 1151 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 POLR1DQ9Y2S0 133 aa8.38□□□□□ -1.07
CTNNA1-230ENST00000521724 KIAA2026Q5HYC2 2103 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 ZNF732B4DXR9 585 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 PHF1O43189 567 aaPredicted RBP8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 CST7O76096 145 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 CD55P08174 381 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 PGCP20142 388 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 ZFP36L1Q07352 338 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 RTL6Q6ICC9 239 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 SLC38A9Q8NBW4 561 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 Q8NFD4 153 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 OR10S1Q8NGN2 331 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 TMEM37Q8WXS4 190 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 C11orf40Q8WZ69 217 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 DNASE2BQ8WZ79 361 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 MSI2Q96DH6 328 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 PLEKHF2Q9H8W4 249 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 HRASLS2Q9NWW9 162 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 MED29Q9NX70 200 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 P4HTMQ9NXG6 502 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 MRPS18CQ9Y3D5 142 aaKnown RBP8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 IGKV1-9A0A0C4DH69 117 aa8.37□□□□□ -1.07
CTNNA1-230ENST00000521724 A0A0J9YY10 115 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms