RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SLC30A7Q8NEW0 376 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR1S2Q8NGQ3 325 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR2A12Q8NGT7 310 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR10K1Q8NGX5 313 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 STOML3Q8TAV4 291 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PIGXQ8TBF5 258 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 WFDC5Q8TCV5 224 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 UBE2E3Q969T4 207 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC25A38Q96DW6 304 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF514Q96K75 400 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 C12orf66Q96MD2 445 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TSSK3Q96PN8 268 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR4K3Q96R72 315 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PANX1Q96RD7 426 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 PFDN5Q99471 154 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TSNAXQ99598 290 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 NRIP2Q9BQI9 281 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 EFCAB11Q9BUY7 163 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 FAIM2Q9BWQ8 316 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TSSK6Q9BXA6 273 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 DEFB126Q9BYW3 111 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TM6SF2Q9BZW4 377 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 TOLLIPQ9H0E2 274 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLITRK2Q9H156 845 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 C20orf85Q9H1P6 137 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SLC38A1Q9H2H9 487 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 RHBGQ9H310 441 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 REEP4Q9H6H4 257 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 BCL2L10Q9HD36 194 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 HRASLSQ9HDD0 168 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 EXOSC4Q9NPD3 245 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 SMCO4Q9NRQ5 59 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 UQCC1Q9NVA1 299 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CLN6Q9NWW5 311 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 KLRF1Q9NZS2 232 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 STOX2Q9P2F5 926 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 COMMD3Q9UBI1 195 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 B4GALT7Q9UBV7 327 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF629Q9UEG4 869 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 Q9UF83 564 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 LSM7Q9UK45 103 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 CLEC4EQ9ULY5 219 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 DUSP12Q9UNI6 340 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 FLVCR2Q9UPI3 526 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 MOKQ9UQ07 419 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 RPL36Q9Y3U8 105 aaKnown RBP2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 FLVCR1Q9Y5Y0 555 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 KIF25-AS1Q9Y6Z4 181 aa2.42□□□□□ -2.02
HMGB1P41-201ENST00000520234 ATG2AQ2TAZ0 1938 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TRAV1-2A0A0B4J238 106 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 A0A0D9SG52 128 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ANKRD20A5PA0PJZ0 165 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 BTBD17A6NE02 478 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 NAP1L6A6NFF2 107 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MGAT4DA6NG13 374 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 C1orf196B1AJZ1 125 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SULT2B1O00204 365 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TNFRSF11BO00300 401 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ITGB1BP1O14713 200 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAMP1O60894 148 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MED6O75586 246 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 NDUFB6O95139 128 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 C1orf105O95561 183 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB36O95755 333 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 AK1P00568 194 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MT-ATP6P00846 226 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MT-ND4P03905 459 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 HLA-DPB1P04440 258 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 APODP05090 189 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD14P08571 375 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 IGFBP1P08833 259 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 DNAH10OSP0CZ25 163 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF35P13682 527 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 PRG2P13727 222 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 KLK2P20151 261 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB5AP20339 215 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TEAD1P28347 426 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 IMPA1P29218 277 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CD70P32970 193 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CRATP43155 626 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SRP9P49458 86 aaKnown RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 EMDP50402 254 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 PPT1P50897 306 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CAV2P51636 162 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CCR8P51685 355 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 HBA1P69905 142 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 CDK6Q00534 326 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF763Q0D2J5 394 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 RAB40BQ12829 278 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZP4Q12836 540 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 SKP2Q13309 424 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 IL18Q14116 193 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 INSL4Q14641 139 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TGIF1Q15583 401 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 TMEM52BQ4KMG9 183 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 MESTQ5EB52 335 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR2G6Q5TZ20 316 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 ZNF57Q68EA5 555 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 OR52W1Q6IF63 320 aa2.41□□□□□ -2.02
HMGB1P41-201ENST00000520234 REEP3Q6NUK4 255 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms