RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 IGHV4-4A0A075B6R2 117 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 A0A096LNT2 108 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 TRAV24A0A0B4J272 114 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 IGHV1-69-2A0A0G2JMI3 117 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 ANXA2P2A6NMY6 339 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 ZNF878C9JN71 531 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 M0R129 80 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 EI24O14681 340 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 SELENOFO60613 162 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 BAG2O95816 211 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 APOC1P02654 83 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 H2BFMP0C1H6 154 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 SELEP16581 610 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 SLC2A5P22732 501 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 HSD11B1P28845 292 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 OTX1P32242 354 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-208ENST00000520228 NAA10P41227 235 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-208ENST00000520228 CRYBB2P43320 205 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 NKX2-1P43699 371 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-208ENST00000520228 NPY4RP50391 375 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 TMEM33P57088 247 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 GRB2P62993 217 aaKnown RBP5.67□□□□□ -1.5
SDCBP-208ENST00000520228 TNFAIP6P98066 277 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-208ENST00000520228 MZT1Q08AG7 82 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 GK2Q14410 553 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-208ENST00000520228 LCN1P1Q5VSP4 162 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 C12orf73Q69YU5 71 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 OR2T2Q6IF00 324 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.67□□□□□ -1.5
SDCBP-208ENST00000520228 OR5AS1Q8N127 324 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 CBR4Q8N4T8 237 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 ZNF283Q8N7M2 679 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 TCEANCQ8N8B7 351 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 OR8G5Q8NG78 346 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 OR2Z1Q8NG97 314 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 OTOSQ8NHW6 89 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 THEM6Q8WUY1 208 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 RNF133Q8WVZ7 376 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 STMN2Q93045 179 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 YIPF5Q969M3 257 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 IL4I1Q96RQ9 567 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 GABARAPL3Q9BY60 117 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 BPESC1Q9GZL8 116 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 YIPF3Q9GZM5 350 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 SP140LQ9H930 580 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 GSN-AS1Q9NRJ2 163 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 USE1Q9NZ43 259 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 ZANQ9Y493 2812 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 DSCAMO60469 2012 aa5.67□□□□□ -1.5
SDCBP-208ENST00000520228 CCDC182A6NF36 153 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 PPIHO43447 177 aaKnown RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 RP2O75695 350 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 LYNP07948 512 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 CD55P08174 381 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 MRPL3P09001 348 aaKnown RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 SLC2A1P11166 492 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 ALOX5APP20292 161 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 OPRL1P41146 370 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 GPR6P46095 362 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 CX3CR1P49238 355 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 HCCSP53701 268 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 CDC42P60953 191 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 ZNF92Q03936 586 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 ZSCAN26Q16670 478 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 TMEM249Q2WGJ8 235 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 HFEQ30201 348 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 SNAI3Q3KNW1 292 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 GLYATL3Q5SZD4 288 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 AADACL4Q5VUY2 407 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 NXNL2Q5VZ03 156 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 CYB5R2Q6BCY4 276 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 TRAT1Q6PIZ9 186 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 Q6ZR03 302 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 PGAP1Q75T13 922 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 MRPL21Q7Z2W9 205 aaKnown RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 GID4Q8IVV7 300 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 BHLHE23Q8NDY6 225 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 OR8J1Q8NGP2 316 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 OR13G1Q8NGZ3 307 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 SPRYD4Q8WW59 207 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 ASB17Q8WXJ9 295 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 CCL17Q92583 94 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 AMELYQ99218 206 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 CNN2Q99439 309 aaKnown RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 C9orf16Q9BUW7 83 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 ZNF275Q9NSD4 429 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 TMEM100Q9NV29 134 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 IMPAD1Q9NX62 359 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 CHCHD3Q9NX63 227 aaKnown RBP5.66□□□□□ -1.5
SDCBP-208ENST00000520228 LAMP5Q9UJQ1 280 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 TLN2Q9Y4G6 2542 aa5.66□□□□□ -1.5
SDCBP-208ENST00000520228 VPS13CQ709C8 3753 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 A0A087WW49 117 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 LRP5LA4QPB2 252 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 C5orf63A6NC05 138 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 GGT3PA6NGU5 568 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 CD300LBA8K4G0 201 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 IQCF6A8MYZ5 107 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 CD5LO43866 347 aa5.65□□□□□ -1.5
SDCBP-208ENST00000520228 CDK2AP2O75956 126 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms