RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 SERPINA7P05543 415 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CSN2P05814 226 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 GLAP06280 429 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 MMP7P09237 267 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 FAM157CP0CG43 387 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 FCGR2AP12318 317 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CCL4P13236 92 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 FAHP16930 419 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 ZNF16P17020 682 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 AKR1C4P17516 323 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 ACKR3P25106 362 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CHATP28329 748 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 BLVRBP30043 206 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 PTGER4P35408 488 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 OR3A2P47893 321 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 FUT6P51993 359 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SNU13P55769 128 aaKnown RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 PCBD1P61457 104 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 Q0VFX4 171 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 FOXO1Q12778 655 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SNAI3Q3KNW1 292 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 RPUSD3Q6P087 351 aaKnown RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 HAGHLQ6PII5 290 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 IL34Q6ZMJ4 242 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 COMMD2Q86X83 199 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 BAP18Q8IXM2 172 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SAXO1Q8IYX7 474 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 TMEM156Q8N614 296 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CSNK2A3Q8NEV1 391 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 LYPD6BQ8NI32 183 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 PIGTQ969N2 578 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 RAB24Q969Q5 203 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 RRNAD1Q96FB5 475 aaKnown RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 NARS2Q96I59 477 aaKnown RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 SEC22AQ96IW7 307 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SMIM8Q96KF7 97 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 ZNF75AQ96N20 296 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 GNRHR2Q96P88 292 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SPACA5Q96QH8 159 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 C2orf88Q9BSF0 95 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 DDA1Q9BW61 102 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 ZNF471Q9BX82 626 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 C1QTNF5Q9BXJ0 243 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SLC5A7Q9GZV3 580 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 ARV1Q9H2C2 271 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SEBOXQ9HB31 216 aaPredicted RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 C1orf123Q9NWV4 160 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 PLEK2Q9NYT0 353 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 METTL1Q9UBP6 276 aaKnown RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 MIOXQ9UGB7 285 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 MCTS1Q9ULC4 181 aaKnown RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 PIGLQ9Y2B2 252 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CARHSP1Q9Y2V2 147 aaKnown RBP4.36□□□□□ -1.71
SDC2-204ENST00000519914 MEMO1Q9Y316 297 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 TIMM10BQ9Y5J6 103 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 CSAG2Q9Y5P2 127 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 POMT1Q9Y6A1 747 aa4.36□□□□□ -1.71
SDC2-204ENST00000519914 SHANK1Q9Y566 2161 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 IGKV1-27A0A075B6S5 117 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 CCDC187A0A096LP49 1063 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 TMEM218A2RU14 115 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 C5orf51A6NDU8 294 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 C1orf196B1AJZ1 125 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 EEF1E1-BLOC1S5C9J1V9 151 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 F5H0A9 414 aaPredicted RBP4.35□□□□□ -1.71
SDC2-204ENST00000519914 F5H5K5 113 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 M0QZK8 103 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 P04436 131 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 FCGR3AP08637 254 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 WNT2P09544 360 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 LIPCP11150 499 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 PGAM2P15259 253 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 ZNF708P17019 499 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 ZNF32P17041 273 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 RBP2P50120 134 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 NPY4RP50391 375 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 RAB5CP51148 216 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 CLDN15P56746 228 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 CARD18P57730 90 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 RND3P61587 244 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 FAM3AP98173 230 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 PSG4Q00888 419 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 HGFACQ04756 655 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 ARFRP1Q13795 201 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 RBM39Q14498 530 aaKnown RBP4.35□□□□□ -1.71
SDC2-204ENST00000519914 TMEM187Q14656 261 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 MST1LQ2TV78 715 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 CHRFAM7AQ494W8 412 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 TMEM268Q5VZI3 342 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 TMEM211Q6ICI0 200 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 KCTD9Q7L273 389 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 GALNTL5Q7Z4T8 443 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 MRPL52Q86TS9 123 aaKnown RBP4.35□□□□□ -1.71
SDC2-204ENST00000519914 TMEM200AQ86VY9 491 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 ZNF561Q8N587 486 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 RELL2Q8NC24 303 aaPredicted RBP4.35□□□□□ -1.71
SDC2-204ENST00000519914 MAFAQ8NHW3 353 aaPredicted RBP4.35□□□□□ -1.71
SDC2-204ENST00000519914 NANPQ8TBE9 248 aa4.35□□□□□ -1.71
SDC2-204ENST00000519914 CASTOR1Q8WTX7 329 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms