RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 Q8IYB0 196 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 HAVCR2Q8TDQ0 301 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 CYYR1Q96J86 154 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 OR14A2Q96R54 314 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 CHCHD3Q9NX63 227 aaKnown RBP10.85□□□□□ -0.67
VEGFA-219ENST00000518824 KIAA2026Q5HYC2 2103 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 TRBV5-7A0A0A0MS05 114 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 MEIOCA2RUB1 952 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 FAM181BA6NEQ2 426 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 C17orf98A8MV24 154 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 H0YJX3 145 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 MMP23AO75900 390 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 CELP19835 753 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 MYF6P23409 242 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 CFPP27918 469 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 UBE2E1P51965 193 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 WNT4P56705 351 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 RELBQ01201 579 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 TAF9Q16594 264 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 LDLRAD2Q5SZI1 272 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 GDPD3Q7L5L3 318 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 SAXO1Q8IYX7 474 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 ZSCAN4Q8NAM6 433 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-219ENST00000518824 TNFAIP8L1Q8WVP5 186 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 SLC25A28Q96A46 364 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 NR1H4Q96RI1 486 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-219ENST00000518824 PPA2Q9H2U2 334 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 SEBOXQ9HB31 216 aaPredicted RBP10.84□□□□□ -0.67
VEGFA-219ENST00000518824 EXOSC4Q9NPD3 245 aaKnown RBP10.84□□□□□ -0.67
VEGFA-219ENST00000518824 NOX4Q9NPH5 578 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 ING3Q9NXR8 418 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 ZNRD1Q9P1U0 126 aa10.84□□□□□ -0.67
VEGFA-219ENST00000518824 LSM2Q9Y333 95 aaKnown RBP10.84□□□□□ -0.67
VEGFA-219ENST00000518824 A0A0G2JK05 382 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 A0A1W2PP11 408 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 SLC33A1O00400 549 aaPredicted RBP10.83□□□□□ -0.68
VEGFA-219ENST00000518824 MYL12BO14950 172 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 ZNF728P0DKX0 622 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 LMO1P25800 156 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 GDNFP39905 211 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 IER3P46695 156 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 GLIPR1P48060 266 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 GUCA2AQ02747 115 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 AESQ08117 197 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 BLMHQ13867 455 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 IRF3Q14653 427 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 PIGYQ3MUY2 71 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 Q499Y3 187 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 SPIN3Q5JUX0 258 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 UTF1Q5T230 341 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 DDI2Q5TDH0 399 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 IZUMO2Q6UXV1 221 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 LHFPL4Q7Z7J7 247 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 DYNAPQ8N1N2 210 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 COQ2Q96H96 371 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 GPER1Q99527 375 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 FAM192AQ9GZU8 254 aa10.83□□□□□ -0.68
VEGFA-219ENST00000518824 HSPB6O14558 160 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 SH2D1BO14796 132 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 ATP6V1G2O95670 118 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 CD2P06729 351 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 ZNF44P15621 663 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 MDKP21741 143 aaPredicted RBP10.82□□□□□ -0.68
VEGFA-219ENST00000518824 EEF1B2P24534 225 aaKnown RBP10.82□□□□□ -0.68
VEGFA-219ENST00000518824 BDKRB2P30411 391 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 GP2P55259 537 aaKnown RBP10.82□□□□□ -0.68
VEGFA-219ENST00000518824 SLC35A2P78381 396 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 MED21Q13503 144 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 YIF1BQ5BJH7 314 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 FAM27D1Q5T7N8 215 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 NCR3LG1Q68D85 454 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 ASCL4Q6XD76 172 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 PXT1Q8NFP0 134 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 OR5D13Q8NGL4 314 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 DERL3Q96Q80 235 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 ANKRD60Q9BZ19 345 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 PPIL3Q9H2H8 161 aaKnown RBP10.82□□□□□ -0.68
VEGFA-219ENST00000518824 ZMAT3Q9HA38 289 aaKnown RBP10.82□□□□□ -0.68
VEGFA-219ENST00000518824 C1RLQ9NZP8 487 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 SF3B6Q9Y3B4 125 aaKnown RBP10.82□□□□□ -0.68
VEGFA-219ENST00000518824 FAM96BQ9Y3D0 163 aa10.82□□□□□ -0.68
VEGFA-219ENST00000518824 TRAV24A0A0B4J272 114 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 MEGF11A6BM72 1044 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 H0YHG0 523 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 MGST3O14880 152 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 DEGS1O15121 323 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 GPR137BO60478 399 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 HTR3BO95264 441 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 ALDOBP05062 364 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 FBP1P09467 338 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 IGHV1-8P0DP01 117 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 JUNBP17275 347 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-219ENST00000518824 ZNF93P35789 620 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-219ENST00000518824 TGFBR2P37173 567 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 PTGFRP43088 359 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 MTNR1BP49286 362 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 P2RX3P56373 397 aa10.81□□□□□ -0.68
VEGFA-219ENST00000518824 ATXN7L3Q14CW9 347 aaPredicted RBP10.81□□□□□ -0.68
VEGFA-219ENST00000518824 ELP2Q6IA86 826 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms