RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 RBP4P02753 201 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 SHBGP04278 402 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4L2P0CJ85 424 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4L3P0CJ86 424 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4L4P0CJ87 422 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4L5P0CJ88 424 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4L6P0CJ89 424 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4L7P0CJ90 424 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 CTLA4P16410 223 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 GPX2P18283 190 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 SLC7A2P52569 658 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 BLCAPP62952 87 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 HIST1H3AP68431 136 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUSP7Q16829 419 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 CYP51A1Q16850 503 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 KRTAP27-1Q3LI81 207 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 SLC36A3Q495N2 470 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 FAM27D1Q5T7N8 215 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 HIST2H3PS2Q5TEC6 136 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 GGNBP1Q5YKI7 109 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 C8orf82Q6P1X6 216 aaPredicted RBP4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4L9Q6RFH8 374 aaPredicted RBP4.8□□□□□ -1.64
CCDC6-203ENST00000518638 HIST2H3AQ71DI3 136 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 OR2W3Q7Z3T1 314 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 OAFQ86UD1 273 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 CCDC190Q86UF4 302 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 SBSPONQ8IVN8 264 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 MKXQ8IYA7 352 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 FGFRL1Q8N441 504 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 OR2AJ1Q8NGZ0 328 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 OR8U1Q8NH10 309 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 CHPT1Q8WUD6 406 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 TMEM255BQ8WV15 326 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 SPTSSAQ969W0 71 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 BPIFA2Q96DR5 249 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 RBMXL1Q96E39 390 aaKnown RBP4.8□□□□□ -1.64
CCDC6-203ENST00000518638 BSCL2Q96G97 398 aaPredicted RBP4.8□□□□□ -1.64
CCDC6-203ENST00000518638 ZNF799Q96GE5 643 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 PITX2Q99697 317 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 WFDC6Q9BQY6 131 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 TLNRD1Q9H1K6 362 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 FN3KQ9H479 309 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 PPP1R3EQ9H7J1 279 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 SRD5A3Q9H8P0 318 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 DUX4Q9UBX2 424 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 HYDINQ4G0P3 5121 aa4.8□□□□□ -1.64
CCDC6-203ENST00000518638 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 IGLV1-36A0A0B4J1U3 117 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 IGHV4-28A0A0C4DH34 117 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 TMEM210A6NLX4 147 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SEC14L6B5MCN3 397 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 H7C1C5 153 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 M0QX08 132 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SDHDO14521 159 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SLC16A7O60669 478 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 FCGR3BO75015 233 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SPAG7O75391 227 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 RHBDL1O75783 438 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 NDUFB4O95168 129 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ARG1P05089 322 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 CD14P08571 375 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ACAA1P09110 424 aaPredicted RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 T-ENOLP0DO92 83 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 IFI30P13284 250 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 CFL1P23528 166 aaKnown RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 COX7A1P24310 79 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 KRTAP5-9P26371 169 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 BRS3P32247 399 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 MDH1P40925 334 aaKnown RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 AMTP48728 403 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 LCN6P62502 163 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 RPL31P62899 125 aaKnown RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SLC35B1P78383 322 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ZNF92Q03936 586 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ST3GAL3Q11203 375 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 TRAP1Q12931 704 aaKnown RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 STX3Q13277 289 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 KRR1Q13601 381 aaKnown RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SSX2Q16385 188 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 DGUOKQ16854 277 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 RFX4Q33E94 735 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ZNF770Q6IQ21 691 aaPredicted RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 KRTAP5-4Q6L8H1 288 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 PRR27Q6MZM9 219 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 DRAM2Q6UX65 266 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 CCDC80Q76M96 950 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 TSEN54Q7Z6J9 526 aaKnown RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 DHDDSQ86SQ9 333 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ZNF695Q8IW36 515 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 EIF1ADQ8N9N8 165 aaKnown RBP4.79□□□□□ -1.64
CCDC6-203ENST00000518638 LRRC75AQ8NAA5 344 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 KLHL30-AS1Q8NEE0 82 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 TMEM185AQ8NFB2 350 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 OR1M1Q8NGA1 313 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 GPR32P1Q8NGA4 272 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 OR56B2PQ8NGI1 322 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 ANGPTL6Q8NI99 470 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 LZICQ8WZA0 190 aa4.79□□□□□ -1.64
CCDC6-203ENST00000518638 SLAMF9Q96A28 289 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms